Gene : Carub.0004s2015 C. rubella v1.1
Defline:  (1 of 5) K07300 - Ca2+:H+ antiporter (chaA, CAX) Genomic Order:  2015
Name:  ? Carub.0004s2015 Secondary Identifier:  ? PAC:39236177
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2015 0.5kb upstream 0.5kb upstream 4015 true scaffold_4: 11053295-11057309 Capsella rubella
Carub.0004s2015 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11056810-11057309 Capsella rubella
Carub.0004s2015 0.5kb downstream 0.5kb downstream 4015 true scaffold_4: 11052795-11056809 Capsella rubella
Carub.0004s2015 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11052795-11053294 Capsella rubella
Carub.0004s2015 1.0kb upstream 1.0kb upstream 4515 true scaffold_4: 11053295-11057809 Capsella rubella
Carub.0004s2015 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11056810-11057809 Capsella rubella
Carub.0004s2015 1.0kb downstream 1.0kb downstream 4515 true scaffold_4: 11052295-11056809 Capsella rubella
Carub.0004s2015 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11052295-11053294 Capsella rubella
Carub.0004s2015 2.0kb upstream 2.0kb upstream 5515 true scaffold_4: 11053295-11058809 Capsella rubella
Carub.0004s2015 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11056810-11058809 Capsella rubella
Carub.0004s2015 2.0kb downstream 2.0kb downstream 5515 true scaffold_4: 11051295-11056809 Capsella rubella
Carub.0004s2015 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11051295-11053294 Capsella rubella
Carub.0004s2015 5.0kb upstream 5.0kb upstream 8515 true scaffold_4: 11053295-11061809 Capsella rubella
Carub.0004s2015 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11056810-11061809 Capsella rubella
Carub.0004s2015 5.0kb downstream 5.0kb downstream 8515 true scaffold_4: 11048295-11056809 Capsella rubella
Carub.0004s2015 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11048295-11053294 Capsella rubella
Carub.0004s2015 10.0kb upstream 10.0kb upstream 13515 true scaffold_4: 11053295-11066809 Capsella rubella
Carub.0004s2015 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11056810-11066809 Capsella rubella
Carub.0004s2015 10.0kb downstream 10.0kb downstream 13515 true scaffold_4: 11043295-11056809 Capsella rubella
Carub.0004s2015 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11043295-11053294 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367790 5261 Brassicaceae View MSA
123838575 5264 Brassicales-Malvales View MSA
124344676 5266 SBM View MSA
124242914 5268 Malvidae View MSA
124065189 5270 Rosid View MSA
123739014 5271 Pentapetalae View MSA
122792056 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain