Gene : Carub.0004s2038 C. rubella v1.1
Defline:  (1 of 23) PTHR31589//PTHR31589:SF17 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MZA15-RELATED Genomic Order:  2038
Name:  ? Carub.0004s2038 Secondary Identifier:  ? PAC:39237027
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2038 0.5kb upstream 0.5kb upstream 2386 true scaffold_4: 11144637-11147022 Capsella rubella
Carub.0004s2038 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11144637-11145136 Capsella rubella
Carub.0004s2038 0.5kb downstream 0.5kb downstream 2386 true scaffold_4: 11145137-11147522 Capsella rubella
Carub.0004s2038 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11147023-11147522 Capsella rubella
Carub.0004s2038 1.0kb upstream 1.0kb upstream 2886 true scaffold_4: 11144137-11147022 Capsella rubella
Carub.0004s2038 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11144137-11145136 Capsella rubella
Carub.0004s2038 1.0kb downstream 1.0kb downstream 2886 true scaffold_4: 11145137-11148022 Capsella rubella
Carub.0004s2038 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11147023-11148022 Capsella rubella
Carub.0004s2038 2.0kb upstream 2.0kb upstream 3886 true scaffold_4: 11143137-11147022 Capsella rubella
Carub.0004s2038 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11143137-11145136 Capsella rubella
Carub.0004s2038 2.0kb downstream 2.0kb downstream 3886 true scaffold_4: 11145137-11149022 Capsella rubella
Carub.0004s2038 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11147023-11149022 Capsella rubella
Carub.0004s2038 5.0kb upstream 5.0kb upstream 6886 true scaffold_4: 11140137-11147022 Capsella rubella
Carub.0004s2038 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11140137-11145136 Capsella rubella
Carub.0004s2038 5.0kb downstream 5.0kb downstream 6886 true scaffold_4: 11145137-11152022 Capsella rubella
Carub.0004s2038 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11147023-11152022 Capsella rubella
Carub.0004s2038 10.0kb upstream 10.0kb upstream 11886 true scaffold_4: 11135137-11147022 Capsella rubella
Carub.0004s2038 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11135137-11145136 Capsella rubella
Carub.0004s2038 10.0kb downstream 10.0kb downstream 11886 true scaffold_4: 11145137-11157022 Capsella rubella
Carub.0004s2038 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11147023-11157022 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381599 5261 Brassicaceae View MSA
123838351 5264 Brassicales-Malvales View MSA
124350658 5266 SBM View MSA
124181106 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain