Gene : Carub.0004s2066 C. rubella v1.1
Defline:  (1 of 1) K01081 - 5'-nucleotidase (E3.1.3.5) Genomic Order:  2066
Name:  ? Carub.0004s2066 Secondary Identifier:  ? PAC:39238124
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5381 Capsella rubella pathologic  
Crubella PWY-5695 Capsella rubella pathologic  
Crubella PWY-6596 Capsella rubella pathologic  
Crubella PWY-6606 Capsella rubella pathologic  
Crubella PWY-6608 Capsella rubella pathologic  
Crubella PWY-7185 Capsella rubella pathologic  
Crubella SALVADEHYPOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2066 0.5kb upstream 0.5kb upstream 2541 true scaffold_4: 11236912-11239452 Capsella rubella
Carub.0004s2066 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11238953-11239452 Capsella rubella
Carub.0004s2066 0.5kb downstream 0.5kb downstream 2541 true scaffold_4: 11236412-11238952 Capsella rubella
Carub.0004s2066 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11236412-11236911 Capsella rubella
Carub.0004s2066 1.0kb upstream 1.0kb upstream 3041 true scaffold_4: 11236912-11239952 Capsella rubella
Carub.0004s2066 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11238953-11239952 Capsella rubella
Carub.0004s2066 1.0kb downstream 1.0kb downstream 3041 true scaffold_4: 11235912-11238952 Capsella rubella
Carub.0004s2066 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11235912-11236911 Capsella rubella
Carub.0004s2066 2.0kb upstream 2.0kb upstream 4041 true scaffold_4: 11236912-11240952 Capsella rubella
Carub.0004s2066 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11238953-11240952 Capsella rubella
Carub.0004s2066 2.0kb downstream 2.0kb downstream 4041 true scaffold_4: 11234912-11238952 Capsella rubella
Carub.0004s2066 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11234912-11236911 Capsella rubella
Carub.0004s2066 5.0kb upstream 5.0kb upstream 7041 true scaffold_4: 11236912-11243952 Capsella rubella
Carub.0004s2066 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11238953-11243952 Capsella rubella
Carub.0004s2066 5.0kb downstream 5.0kb downstream 7041 true scaffold_4: 11231912-11238952 Capsella rubella
Carub.0004s2066 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11231912-11236911 Capsella rubella
Carub.0004s2066 10.0kb upstream 10.0kb upstream 12041 true scaffold_4: 11236912-11248952 Capsella rubella
Carub.0004s2066 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11238953-11248952 Capsella rubella
Carub.0004s2066 10.0kb downstream 10.0kb downstream 12041 true scaffold_4: 11226912-11238952 Capsella rubella
Carub.0004s2066 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11226912-11236911 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370315 5261 Brassicaceae View MSA
123829373 5264 Brassicales-Malvales View MSA
124345573 5266 SBM View MSA
124243297 5268 Malvidae View MSA
124064443 5270 Rosid View MSA
123745668 5271 Pentapetalae View MSA
122789463 5272 Eudicot View MSA
122047014 5273 Angiosperm View MSA
121348169 5274 Embryophyte View MSA
123380756 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain