Gene : Carub.0004s1939 C. rubella v1.1
Defline:  (1 of 52) PF00892 - EamA-like transporter family (EamA) Genomic Order:  1939
Name:  ? Carub.0004s1939 Secondary Identifier:  ? PAC:39238993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1939 0.5kb upstream 0.5kb upstream 3226 true scaffold_4: 10759982-10763207 Capsella rubella
Carub.0004s1939 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10762708-10763207 Capsella rubella
Carub.0004s1939 0.5kb downstream 0.5kb downstream 3226 true scaffold_4: 10759482-10762707 Capsella rubella
Carub.0004s1939 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10759482-10759981 Capsella rubella
Carub.0004s1939 1.0kb upstream 1.0kb upstream 3726 true scaffold_4: 10759982-10763707 Capsella rubella
Carub.0004s1939 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10762708-10763707 Capsella rubella
Carub.0004s1939 1.0kb downstream 1.0kb downstream 3726 true scaffold_4: 10758982-10762707 Capsella rubella
Carub.0004s1939 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10758982-10759981 Capsella rubella
Carub.0004s1939 2.0kb upstream 2.0kb upstream 4726 true scaffold_4: 10759982-10764707 Capsella rubella
Carub.0004s1939 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10762708-10764707 Capsella rubella
Carub.0004s1939 2.0kb downstream 2.0kb downstream 4726 true scaffold_4: 10757982-10762707 Capsella rubella
Carub.0004s1939 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10757982-10759981 Capsella rubella
Carub.0004s1939 5.0kb upstream 5.0kb upstream 7726 true scaffold_4: 10759982-10767707 Capsella rubella
Carub.0004s1939 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10762708-10767707 Capsella rubella
Carub.0004s1939 5.0kb downstream 5.0kb downstream 7726 true scaffold_4: 10754982-10762707 Capsella rubella
Carub.0004s1939 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10754982-10759981 Capsella rubella
Carub.0004s1939 10.0kb upstream 10.0kb upstream 12726 true scaffold_4: 10759982-10772707 Capsella rubella
Carub.0004s1939 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10762708-10772707 Capsella rubella
Carub.0004s1939 10.0kb downstream 10.0kb downstream 12726 true scaffold_4: 10749982-10762707 Capsella rubella
Carub.0004s1939 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10749982-10759981 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376333 5261 Brassicaceae View MSA
123835121 5264 Brassicales-Malvales View MSA
124347038 5266 SBM View MSA
124241530 5268 Malvidae View MSA
124069279 5270 Rosid View MSA
123751388 5271 Pentapetalae View MSA
122794828 5272 Eudicot View MSA
122051256 5273 Angiosperm View MSA
121351883 5274 Embryophyte View MSA
123382389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain