Gene : Carub.0004s1957 C. rubella v1.1
Defline:  (1 of 1) PTHR31867:SF29 - EXPANSIN-A3 Genomic Order:  1957
Name:  ? Carub.0004s1957 Secondary Identifier:  ? PAC:39239058
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1957 0.5kb upstream 0.5kb upstream 2507 true scaffold_4: 10827293-10829799 Capsella rubella
Carub.0004s1957 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10829300-10829799 Capsella rubella
Carub.0004s1957 0.5kb downstream 0.5kb downstream 2507 true scaffold_4: 10826793-10829299 Capsella rubella
Carub.0004s1957 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10826793-10827292 Capsella rubella
Carub.0004s1957 1.0kb upstream 1.0kb upstream 3007 true scaffold_4: 10827293-10830299 Capsella rubella
Carub.0004s1957 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10829300-10830299 Capsella rubella
Carub.0004s1957 1.0kb downstream 1.0kb downstream 3007 true scaffold_4: 10826293-10829299 Capsella rubella
Carub.0004s1957 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10826293-10827292 Capsella rubella
Carub.0004s1957 2.0kb upstream 2.0kb upstream 4007 true scaffold_4: 10827293-10831299 Capsella rubella
Carub.0004s1957 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10829300-10831299 Capsella rubella
Carub.0004s1957 2.0kb downstream 2.0kb downstream 4007 true scaffold_4: 10825293-10829299 Capsella rubella
Carub.0004s1957 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10825293-10827292 Capsella rubella
Carub.0004s1957 5.0kb upstream 5.0kb upstream 7007 true scaffold_4: 10827293-10834299 Capsella rubella
Carub.0004s1957 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10829300-10834299 Capsella rubella
Carub.0004s1957 5.0kb downstream 5.0kb downstream 7007 true scaffold_4: 10822293-10829299 Capsella rubella
Carub.0004s1957 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10822293-10827292 Capsella rubella
Carub.0004s1957 10.0kb upstream 10.0kb upstream 12007 true scaffold_4: 10827293-10839299 Capsella rubella
Carub.0004s1957 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10829300-10839299 Capsella rubella
Carub.0004s1957 10.0kb downstream 10.0kb downstream 12007 true scaffold_4: 10817293-10829299 Capsella rubella
Carub.0004s1957 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10817293-10827292 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362035 5261 Brassicaceae View MSA
123798293 5264 Brassicales-Malvales View MSA
124295953 5266 SBM View MSA
124249607 5268 Malvidae View MSA
124071064 5270 Rosid View MSA
123750763 5271 Pentapetalae View MSA
122796391 5272 Eudicot View MSA
122047888 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain