Gene : Carub.0004s1956 C. rubella v1.1
Defline:  (1 of 1) PTHR10641:SF457 - TRANSCRIPTION FACTOR AS1 Genomic Order:  1956
Name:  ? Carub.0004s1956 Secondary Identifier:  ? PAC:39238258
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1956 0.5kb upstream 0.5kb upstream 2373 true scaffold_4: 10821031-10823403 Capsella rubella
Carub.0004s1956 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10822904-10823403 Capsella rubella
Carub.0004s1956 0.5kb downstream 0.5kb downstream 2373 true scaffold_4: 10820531-10822903 Capsella rubella
Carub.0004s1956 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10820531-10821030 Capsella rubella
Carub.0004s1956 1.0kb upstream 1.0kb upstream 2873 true scaffold_4: 10821031-10823903 Capsella rubella
Carub.0004s1956 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10822904-10823903 Capsella rubella
Carub.0004s1956 1.0kb downstream 1.0kb downstream 2873 true scaffold_4: 10820031-10822903 Capsella rubella
Carub.0004s1956 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10820031-10821030 Capsella rubella
Carub.0004s1956 2.0kb upstream 2.0kb upstream 3873 true scaffold_4: 10821031-10824903 Capsella rubella
Carub.0004s1956 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10822904-10824903 Capsella rubella
Carub.0004s1956 2.0kb downstream 2.0kb downstream 3873 true scaffold_4: 10819031-10822903 Capsella rubella
Carub.0004s1956 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10819031-10821030 Capsella rubella
Carub.0004s1956 5.0kb upstream 5.0kb upstream 6873 true scaffold_4: 10821031-10827903 Capsella rubella
Carub.0004s1956 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10822904-10827903 Capsella rubella
Carub.0004s1956 5.0kb downstream 5.0kb downstream 6873 true scaffold_4: 10816031-10822903 Capsella rubella
Carub.0004s1956 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10816031-10821030 Capsella rubella
Carub.0004s1956 10.0kb upstream 10.0kb upstream 11873 true scaffold_4: 10821031-10832903 Capsella rubella
Carub.0004s1956 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10822904-10832903 Capsella rubella
Carub.0004s1956 10.0kb downstream 10.0kb downstream 11873 true scaffold_4: 10811031-10822903 Capsella rubella
Carub.0004s1956 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10811031-10821030 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374857 5261 Brassicaceae View MSA
123840820 5264 Brassicales-Malvales View MSA
124345581 5266 SBM View MSA
124249692 5268 Malvidae View MSA
124071895 5270 Rosid View MSA
123753219 5271 Pentapetalae View MSA
122787054 5272 Eudicot View MSA
122045280 5273 Angiosperm View MSA
121310428 5274 Embryophyte View MSA
123347915 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain