Gene : Carub.0004s2226 C. rubella v1.1

Defline:  (1 of 2) PTHR34953//PTHR34953:SF1 - FAMILY NOT NAMED // ALPHA/BETA HYDROLASE RELATED PROTEIN Genomic Order:  2226
Name:  ? Carub.0004s2226 Secondary Identifier:  ? PAC:39239060

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2226 0.5kb upstream 0.5kb upstream 2589 true scaffold_4: 11874858-11877446 Capsella rubella
Carub.0004s2226 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11874858-11875357 Capsella rubella
Carub.0004s2226 0.5kb downstream 0.5kb downstream 2589 true scaffold_4: 11875358-11877946 Capsella rubella
Carub.0004s2226 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11877447-11877946 Capsella rubella
Carub.0004s2226 1.0kb upstream 1.0kb upstream 3089 true scaffold_4: 11874358-11877446 Capsella rubella
Carub.0004s2226 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11874358-11875357 Capsella rubella
Carub.0004s2226 1.0kb downstream 1.0kb downstream 3089 true scaffold_4: 11875358-11878446 Capsella rubella
Carub.0004s2226 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11877447-11878446 Capsella rubella
Carub.0004s2226 2.0kb upstream 2.0kb upstream 4089 true scaffold_4: 11873358-11877446 Capsella rubella
Carub.0004s2226 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11873358-11875357 Capsella rubella
Carub.0004s2226 2.0kb downstream 2.0kb downstream 4089 true scaffold_4: 11875358-11879446 Capsella rubella
Carub.0004s2226 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11877447-11879446 Capsella rubella
Carub.0004s2226 5.0kb upstream 5.0kb upstream 7089 true scaffold_4: 11870358-11877446 Capsella rubella
Carub.0004s2226 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11870358-11875357 Capsella rubella
Carub.0004s2226 5.0kb downstream 5.0kb downstream 7089 true scaffold_4: 11875358-11882446 Capsella rubella
Carub.0004s2226 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11877447-11882446 Capsella rubella
Carub.0004s2226 10.0kb upstream 10.0kb upstream 12089 true scaffold_4: 11865358-11877446 Capsella rubella
Carub.0004s2226 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11865358-11875357 Capsella rubella
Carub.0004s2226 10.0kb downstream 10.0kb downstream 12089 true scaffold_4: 11875358-11887446 Capsella rubella
Carub.0004s2226 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11877447-11887446 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368274 5261 Brassicaceae View MSA
123836692 5264 Brassicales-Malvales View MSA
124337185 5266 SBM View MSA
124243541 5268 Malvidae View MSA
124066621 5270 Rosid View MSA
123741764 5271 Pentapetalae View MSA
122789976 5272 Eudicot View MSA
122043684 5273 Angiosperm View MSA
121346318 5274 Embryophyte View MSA
123380366 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain