Gene : Carub.0004s2234 C. rubella v1.1
Defline:  (1 of 1) PTHR11638:SF113 - DOUBLE CLP-N MOTIF-CONTAINING P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  2234
Name:  ? Carub.0004s2234 Secondary Identifier:  ? PAC:39237279
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2234 0.5kb upstream 0.5kb upstream 3952 true scaffold_4: 11905010-11908961 Capsella rubella
Carub.0004s2234 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11905010-11905509 Capsella rubella
Carub.0004s2234 0.5kb downstream 0.5kb downstream 3952 true scaffold_4: 11905510-11909461 Capsella rubella
Carub.0004s2234 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11908962-11909461 Capsella rubella
Carub.0004s2234 1.0kb upstream 1.0kb upstream 4452 true scaffold_4: 11904510-11908961 Capsella rubella
Carub.0004s2234 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11904510-11905509 Capsella rubella
Carub.0004s2234 1.0kb downstream 1.0kb downstream 4452 true scaffold_4: 11905510-11909961 Capsella rubella
Carub.0004s2234 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11908962-11909961 Capsella rubella
Carub.0004s2234 2.0kb upstream 2.0kb upstream 5452 true scaffold_4: 11903510-11908961 Capsella rubella
Carub.0004s2234 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11903510-11905509 Capsella rubella
Carub.0004s2234 2.0kb downstream 2.0kb downstream 5452 true scaffold_4: 11905510-11910961 Capsella rubella
Carub.0004s2234 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11908962-11910961 Capsella rubella
Carub.0004s2234 5.0kb upstream 5.0kb upstream 8452 true scaffold_4: 11900510-11908961 Capsella rubella
Carub.0004s2234 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11900510-11905509 Capsella rubella
Carub.0004s2234 5.0kb downstream 5.0kb downstream 8452 true scaffold_4: 11905510-11913961 Capsella rubella
Carub.0004s2234 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11908962-11913961 Capsella rubella
Carub.0004s2234 10.0kb upstream 10.0kb upstream 13452 true scaffold_4: 11895510-11908961 Capsella rubella
Carub.0004s2234 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11895510-11905509 Capsella rubella
Carub.0004s2234 10.0kb downstream 10.0kb downstream 13452 true scaffold_4: 11905510-11918961 Capsella rubella
Carub.0004s2234 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11908962-11918961 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368583 5261 Brassicaceae View MSA
123838381 5264 Brassicales-Malvales View MSA
124339611 5266 SBM View MSA
124251457 5268 Malvidae View MSA
124066769 5270 Rosid View MSA
123749944 5271 Pentapetalae View MSA
122787695 5272 Eudicot View MSA
122043701 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain