Gene : Carub.0004s2228 C. rubella v1.1
Defline:  (1 of 4) PTHR13848//PTHR13848:SF5 - FAMILY NOT NAMED // PROTEIN YIPPEE-LIKE Genomic Order:  2228
Name:  ? Carub.0004s2228 Secondary Identifier:  ? PAC:39236749
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2228 0.5kb upstream 0.5kb upstream 1938 true scaffold_4: 11880530-11882467 Capsella rubella
Carub.0004s2228 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11880530-11881029 Capsella rubella
Carub.0004s2228 0.5kb downstream 0.5kb downstream 1938 true scaffold_4: 11881030-11882967 Capsella rubella
Carub.0004s2228 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11882468-11882967 Capsella rubella
Carub.0004s2228 1.0kb upstream 1.0kb upstream 2438 true scaffold_4: 11880030-11882467 Capsella rubella
Carub.0004s2228 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11880030-11881029 Capsella rubella
Carub.0004s2228 1.0kb downstream 1.0kb downstream 2438 true scaffold_4: 11881030-11883467 Capsella rubella
Carub.0004s2228 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11882468-11883467 Capsella rubella
Carub.0004s2228 2.0kb upstream 2.0kb upstream 3438 true scaffold_4: 11879030-11882467 Capsella rubella
Carub.0004s2228 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11879030-11881029 Capsella rubella
Carub.0004s2228 2.0kb downstream 2.0kb downstream 3438 true scaffold_4: 11881030-11884467 Capsella rubella
Carub.0004s2228 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11882468-11884467 Capsella rubella
Carub.0004s2228 5.0kb upstream 5.0kb upstream 6438 true scaffold_4: 11876030-11882467 Capsella rubella
Carub.0004s2228 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11876030-11881029 Capsella rubella
Carub.0004s2228 5.0kb downstream 5.0kb downstream 6438 true scaffold_4: 11881030-11887467 Capsella rubella
Carub.0004s2228 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11882468-11887467 Capsella rubella
Carub.0004s2228 10.0kb upstream 10.0kb upstream 11438 true scaffold_4: 11871030-11882467 Capsella rubella
Carub.0004s2228 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11871030-11881029 Capsella rubella
Carub.0004s2228 10.0kb downstream 10.0kb downstream 11438 true scaffold_4: 11881030-11892467 Capsella rubella
Carub.0004s2228 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11882468-11892467 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367231 5261 Brassicaceae View MSA
123829893 5264 Brassicales-Malvales View MSA
124342881 5266 SBM View MSA
124240799 5268 Malvidae View MSA
124065020 5270 Rosid View MSA
123748773 5271 Pentapetalae View MSA
122791142 5272 Eudicot View MSA
122047992 5273 Angiosperm View MSA
123428914 5275 Viridiplantae View MSA
121350900 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain