Gene : Carub.0004s2241 C. rubella v1.1
Defline:  (1 of 1) 2.4.1.131 - GDP-Man:Man(3)GlcNAc(2)-PP-dolichol alpha-1,2-mannosyltransferase Genomic Order:  2241
Name:  ? Carub.0004s2241 Secondary Identifier:  ? PAC:39238580
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2241 0.5kb upstream 0.5kb upstream 2745 true scaffold_4: 11930252-11932996 Capsella rubella
Carub.0004s2241 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11930252-11930751 Capsella rubella
Carub.0004s2241 0.5kb downstream 0.5kb downstream 2745 true scaffold_4: 11930752-11933496 Capsella rubella
Carub.0004s2241 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11932997-11933496 Capsella rubella
Carub.0004s2241 1.0kb upstream 1.0kb upstream 3245 true scaffold_4: 11929752-11932996 Capsella rubella
Carub.0004s2241 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11929752-11930751 Capsella rubella
Carub.0004s2241 1.0kb downstream 1.0kb downstream 3245 true scaffold_4: 11930752-11933996 Capsella rubella
Carub.0004s2241 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11932997-11933996 Capsella rubella
Carub.0004s2241 2.0kb upstream 2.0kb upstream 4245 true scaffold_4: 11928752-11932996 Capsella rubella
Carub.0004s2241 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11928752-11930751 Capsella rubella
Carub.0004s2241 2.0kb downstream 2.0kb downstream 4245 true scaffold_4: 11930752-11934996 Capsella rubella
Carub.0004s2241 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11932997-11934996 Capsella rubella
Carub.0004s2241 5.0kb upstream 5.0kb upstream 7245 true scaffold_4: 11925752-11932996 Capsella rubella
Carub.0004s2241 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11925752-11930751 Capsella rubella
Carub.0004s2241 5.0kb downstream 5.0kb downstream 7245 true scaffold_4: 11930752-11937996 Capsella rubella
Carub.0004s2241 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11932997-11937996 Capsella rubella
Carub.0004s2241 10.0kb upstream 10.0kb upstream 12245 true scaffold_4: 11920752-11932996 Capsella rubella
Carub.0004s2241 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11920752-11930751 Capsella rubella
Carub.0004s2241 10.0kb downstream 10.0kb downstream 12245 true scaffold_4: 11930752-11942996 Capsella rubella
Carub.0004s2241 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11932997-11942996 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377953 5261 Brassicaceae View MSA
123836966 5264 Brassicales-Malvales View MSA
124346935 5266 SBM View MSA
124245452 5268 Malvidae View MSA
124069266 5270 Rosid View MSA
123741917 5271 Pentapetalae View MSA
122794409 5272 Eudicot View MSA
122048989 5273 Angiosperm View MSA
121348193 5274 Embryophyte View MSA
123425539 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain