Gene : Carub.0004s2290 C. rubella v1.1
Defline:  (1 of 2) PTHR31867:SF22 - EXPANSIN-A8 Genomic Order:  2290
Name:  ? Carub.0004s2290 Secondary Identifier:  ? PAC:39238571
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2290 0.5kb upstream 0.5kb upstream 1480 true scaffold_4: 12097067-12098546 Capsella rubella
Carub.0004s2290 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12098047-12098546 Capsella rubella
Carub.0004s2290 0.5kb downstream 0.5kb downstream 1480 true scaffold_4: 12096567-12098046 Capsella rubella
Carub.0004s2290 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12096567-12097066 Capsella rubella
Carub.0004s2290 1.0kb upstream 1.0kb upstream 1980 true scaffold_4: 12097067-12099046 Capsella rubella
Carub.0004s2290 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12098047-12099046 Capsella rubella
Carub.0004s2290 1.0kb downstream 1.0kb downstream 1980 true scaffold_4: 12096067-12098046 Capsella rubella
Carub.0004s2290 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12096067-12097066 Capsella rubella
Carub.0004s2290 2.0kb upstream 2.0kb upstream 2980 true scaffold_4: 12097067-12100046 Capsella rubella
Carub.0004s2290 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12098047-12100046 Capsella rubella
Carub.0004s2290 2.0kb downstream 2.0kb downstream 2980 true scaffold_4: 12095067-12098046 Capsella rubella
Carub.0004s2290 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12095067-12097066 Capsella rubella
Carub.0004s2290 5.0kb upstream 5.0kb upstream 5980 true scaffold_4: 12097067-12103046 Capsella rubella
Carub.0004s2290 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12098047-12103046 Capsella rubella
Carub.0004s2290 5.0kb downstream 5.0kb downstream 5980 true scaffold_4: 12092067-12098046 Capsella rubella
Carub.0004s2290 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12092067-12097066 Capsella rubella
Carub.0004s2290 10.0kb upstream 10.0kb upstream 10980 true scaffold_4: 12097067-12108046 Capsella rubella
Carub.0004s2290 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12098047-12108046 Capsella rubella
Carub.0004s2290 10.0kb downstream 10.0kb downstream 10980 true scaffold_4: 12087067-12098046 Capsella rubella
Carub.0004s2290 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12087067-12097066 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380816 5261 Brassicaceae View MSA
123839732 5264 Brassicales-Malvales View MSA
124349436 5266 SBM View MSA
124239479 5268 Malvidae View MSA
124070861 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain