Gene : Carub.0004s2288 C. rubella v1.1
Defline:  (1 of 5) PTHR11106 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED Genomic Order:  2288
Name:  ? Carub.0004s2288 Secondary Identifier:  ? PAC:39239163
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2288 0.5kb upstream 0.5kb upstream 2179 true scaffold_4: 12093324-12095502 Capsella rubella
Carub.0004s2288 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12095003-12095502 Capsella rubella
Carub.0004s2288 0.5kb downstream 0.5kb downstream 2179 true scaffold_4: 12092824-12095002 Capsella rubella
Carub.0004s2288 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12092824-12093323 Capsella rubella
Carub.0004s2288 1.0kb upstream 1.0kb upstream 2679 true scaffold_4: 12093324-12096002 Capsella rubella
Carub.0004s2288 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12095003-12096002 Capsella rubella
Carub.0004s2288 1.0kb downstream 1.0kb downstream 2679 true scaffold_4: 12092324-12095002 Capsella rubella
Carub.0004s2288 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12092324-12093323 Capsella rubella
Carub.0004s2288 2.0kb upstream 2.0kb upstream 3679 true scaffold_4: 12093324-12097002 Capsella rubella
Carub.0004s2288 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12095003-12097002 Capsella rubella
Carub.0004s2288 2.0kb downstream 2.0kb downstream 3679 true scaffold_4: 12091324-12095002 Capsella rubella
Carub.0004s2288 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12091324-12093323 Capsella rubella
Carub.0004s2288 5.0kb upstream 5.0kb upstream 6679 true scaffold_4: 12093324-12100002 Capsella rubella
Carub.0004s2288 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12095003-12100002 Capsella rubella
Carub.0004s2288 5.0kb downstream 5.0kb downstream 6679 true scaffold_4: 12088324-12095002 Capsella rubella
Carub.0004s2288 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12088324-12093323 Capsella rubella
Carub.0004s2288 10.0kb upstream 10.0kb upstream 11679 true scaffold_4: 12093324-12105002 Capsella rubella
Carub.0004s2288 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12095003-12105002 Capsella rubella
Carub.0004s2288 10.0kb downstream 10.0kb downstream 11679 true scaffold_4: 12083324-12095002 Capsella rubella
Carub.0004s2288 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12083324-12093323 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366491 5261 Brassicaceae View MSA
123839273 5264 Brassicales-Malvales View MSA
124337612 5266 SBM View MSA
124242045 5268 Malvidae View MSA
124063406 5270 Rosid View MSA
123746303 5271 Pentapetalae View MSA
122790136 5272 Eudicot View MSA
122047973 5273 Angiosperm View MSA
121350961 5274 Embryophyte View MSA
123428110 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain