Gene : Carub.0004s2308 C. rubella v1.1

Defline:  (1 of 1) K15025 - probable RNA-binding protein EIF1AD (EIF1AD) Genomic Order:  2308
Name:  ? Carub.0004s2308 Secondary Identifier:  ? PAC:39236001

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2308 0.5kb upstream 0.5kb upstream 1788 true scaffold_4: 12162461-12164248 Capsella rubella
Carub.0004s2308 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12162461-12162960 Capsella rubella
Carub.0004s2308 0.5kb downstream 0.5kb downstream 1788 true scaffold_4: 12162961-12164748 Capsella rubella
Carub.0004s2308 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12164249-12164748 Capsella rubella
Carub.0004s2308 1.0kb upstream 1.0kb upstream 2288 true scaffold_4: 12161961-12164248 Capsella rubella
Carub.0004s2308 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12161961-12162960 Capsella rubella
Carub.0004s2308 1.0kb downstream 1.0kb downstream 2288 true scaffold_4: 12162961-12165248 Capsella rubella
Carub.0004s2308 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12164249-12165248 Capsella rubella
Carub.0004s2308 2.0kb upstream 2.0kb upstream 3288 true scaffold_4: 12160961-12164248 Capsella rubella
Carub.0004s2308 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12160961-12162960 Capsella rubella
Carub.0004s2308 2.0kb downstream 2.0kb downstream 3288 true scaffold_4: 12162961-12166248 Capsella rubella
Carub.0004s2308 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12164249-12166248 Capsella rubella
Carub.0004s2308 5.0kb upstream 5.0kb upstream 6288 true scaffold_4: 12157961-12164248 Capsella rubella
Carub.0004s2308 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12157961-12162960 Capsella rubella
Carub.0004s2308 5.0kb downstream 5.0kb downstream 6288 true scaffold_4: 12162961-12169248 Capsella rubella
Carub.0004s2308 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12164249-12169248 Capsella rubella
Carub.0004s2308 10.0kb upstream 10.0kb upstream 11288 true scaffold_4: 12152961-12164248 Capsella rubella
Carub.0004s2308 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12152961-12162960 Capsella rubella
Carub.0004s2308 10.0kb downstream 10.0kb downstream 11288 true scaffold_4: 12162961-12174248 Capsella rubella
Carub.0004s2308 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12164249-12174248 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363330 5261 Brassicaceae View MSA
123832904 5264 Brassicales-Malvales View MSA
124321831 5266 SBM View MSA
124242455 5268 Malvidae View MSA
124074389 5270 Rosid View MSA
123739178 5271 Pentapetalae View MSA
122790312 5272 Eudicot View MSA
122047089 5273 Angiosperm View MSA
121344267 5274 Embryophyte View MSA
123425448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain