Gene : Carub.0004s2101 C. rubella v1.1
Defline:  (1 of 12) 2.3.1.20//2.3.1.75 - Diacylglycerol O-acyltransferase / Diglyceride acyltransferase // Long-chain-alcohol O-fatty-acyltransferase / Wax synthase Genomic Order:  2101
Name:  ? Carub.0004s2101 Secondary Identifier:  ? PAC:39238354
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5885 Capsella rubella pathologic  
Crubella TRIGLSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2101 0.5kb upstream 0.5kb upstream 2607 true scaffold_4: 11356985-11359591 Capsella rubella
Carub.0004s2101 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11356985-11357484 Capsella rubella
Carub.0004s2101 0.5kb downstream 0.5kb downstream 2607 true scaffold_4: 11357485-11360091 Capsella rubella
Carub.0004s2101 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11359592-11360091 Capsella rubella
Carub.0004s2101 1.0kb upstream 1.0kb upstream 3107 true scaffold_4: 11356485-11359591 Capsella rubella
Carub.0004s2101 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11356485-11357484 Capsella rubella
Carub.0004s2101 1.0kb downstream 1.0kb downstream 3107 true scaffold_4: 11357485-11360591 Capsella rubella
Carub.0004s2101 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11359592-11360591 Capsella rubella
Carub.0004s2101 2.0kb upstream 2.0kb upstream 4107 true scaffold_4: 11355485-11359591 Capsella rubella
Carub.0004s2101 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11355485-11357484 Capsella rubella
Carub.0004s2101 2.0kb downstream 2.0kb downstream 4107 true scaffold_4: 11357485-11361591 Capsella rubella
Carub.0004s2101 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11359592-11361591 Capsella rubella
Carub.0004s2101 5.0kb upstream 5.0kb upstream 7107 true scaffold_4: 11352485-11359591 Capsella rubella
Carub.0004s2101 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11352485-11357484 Capsella rubella
Carub.0004s2101 5.0kb downstream 5.0kb downstream 7107 true scaffold_4: 11357485-11364591 Capsella rubella
Carub.0004s2101 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11359592-11364591 Capsella rubella
Carub.0004s2101 10.0kb upstream 10.0kb upstream 12107 true scaffold_4: 11347485-11359591 Capsella rubella
Carub.0004s2101 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11347485-11357484 Capsella rubella
Carub.0004s2101 10.0kb downstream 10.0kb downstream 12107 true scaffold_4: 11357485-11369591 Capsella rubella
Carub.0004s2101 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11359592-11369591 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381552 5261 Brassicaceae View MSA
123803305 5264 Brassicales-Malvales View MSA
124300422 5266 SBM View MSA
124151609 5268 Malvidae View MSA
124072353 5270 Rosid View MSA
123749646 5271 Pentapetalae View MSA
122794217 5272 Eudicot View MSA
122046091 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121351027 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain