Gene : Carub.0004s2116 C. rubella v1.1
Defline:  (1 of 3) PTHR27001//PTHR27001:SF29 - FAMILY NOT NAMED // PROTEIN KINASE FAMILY PROTEIN-RELATED Genomic Order:  2116
Name:  ? Carub.0004s2116 Secondary Identifier:  ? PAC:39236691
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2116 0.5kb upstream 0.5kb upstream 2889 true scaffold_4: 11403091-11405979 Capsella rubella
Carub.0004s2116 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11403091-11403590 Capsella rubella
Carub.0004s2116 0.5kb downstream 0.5kb downstream 2889 true scaffold_4: 11403591-11406479 Capsella rubella
Carub.0004s2116 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11405980-11406479 Capsella rubella
Carub.0004s2116 1.0kb upstream 1.0kb upstream 3389 true scaffold_4: 11402591-11405979 Capsella rubella
Carub.0004s2116 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11402591-11403590 Capsella rubella
Carub.0004s2116 1.0kb downstream 1.0kb downstream 3389 true scaffold_4: 11403591-11406979 Capsella rubella
Carub.0004s2116 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11405980-11406979 Capsella rubella
Carub.0004s2116 2.0kb upstream 2.0kb upstream 4389 true scaffold_4: 11401591-11405979 Capsella rubella
Carub.0004s2116 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11401591-11403590 Capsella rubella
Carub.0004s2116 2.0kb downstream 2.0kb downstream 4389 true scaffold_4: 11403591-11407979 Capsella rubella
Carub.0004s2116 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11405980-11407979 Capsella rubella
Carub.0004s2116 5.0kb upstream 5.0kb upstream 7389 true scaffold_4: 11398591-11405979 Capsella rubella
Carub.0004s2116 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11398591-11403590 Capsella rubella
Carub.0004s2116 5.0kb downstream 5.0kb downstream 7389 true scaffold_4: 11403591-11410979 Capsella rubella
Carub.0004s2116 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11405980-11410979 Capsella rubella
Carub.0004s2116 10.0kb upstream 10.0kb upstream 12389 true scaffold_4: 11393591-11405979 Capsella rubella
Carub.0004s2116 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11393591-11403590 Capsella rubella
Carub.0004s2116 10.0kb downstream 10.0kb downstream 12389 true scaffold_4: 11403591-11415979 Capsella rubella
Carub.0004s2116 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11405980-11415979 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374699 5261 Brassicaceae View MSA
123840053 5264 Brassicales-Malvales View MSA
124340694 5266 SBM View MSA
124244293 5268 Malvidae View MSA
124061975 5270 Rosid View MSA
123752129 5271 Pentapetalae View MSA
122792935 5272 Eudicot View MSA
122046245 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350468 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain