Gene : Carub.0004s2156 C. rubella v1.1

Defline:  (1 of 689) PF00646 - F-box domain (F-box) Genomic Order:  2156
Name:  ? Carub.0004s2156 Secondary Identifier:  ? PAC:39237949

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2156 0.5kb upstream 0.5kb upstream 1891 true scaffold_4: 11582526-11584416 Capsella rubella
Carub.0004s2156 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11583917-11584416 Capsella rubella
Carub.0004s2156 0.5kb downstream 0.5kb downstream 1891 true scaffold_4: 11582026-11583916 Capsella rubella
Carub.0004s2156 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11582026-11582525 Capsella rubella
Carub.0004s2156 1.0kb upstream 1.0kb upstream 2391 true scaffold_4: 11582526-11584916 Capsella rubella
Carub.0004s2156 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11583917-11584916 Capsella rubella
Carub.0004s2156 1.0kb downstream 1.0kb downstream 2391 true scaffold_4: 11581526-11583916 Capsella rubella
Carub.0004s2156 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11581526-11582525 Capsella rubella
Carub.0004s2156 2.0kb upstream 2.0kb upstream 3391 true scaffold_4: 11582526-11585916 Capsella rubella
Carub.0004s2156 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11583917-11585916 Capsella rubella
Carub.0004s2156 2.0kb downstream 2.0kb downstream 3391 true scaffold_4: 11580526-11583916 Capsella rubella
Carub.0004s2156 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11580526-11582525 Capsella rubella
Carub.0004s2156 5.0kb upstream 5.0kb upstream 6391 true scaffold_4: 11582526-11588916 Capsella rubella
Carub.0004s2156 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11583917-11588916 Capsella rubella
Carub.0004s2156 5.0kb downstream 5.0kb downstream 6391 true scaffold_4: 11577526-11583916 Capsella rubella
Carub.0004s2156 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11577526-11582525 Capsella rubella
Carub.0004s2156 10.0kb upstream 10.0kb upstream 11391 true scaffold_4: 11582526-11593916 Capsella rubella
Carub.0004s2156 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11583917-11593916 Capsella rubella
Carub.0004s2156 10.0kb downstream 10.0kb downstream 11391 true scaffold_4: 11572526-11583916 Capsella rubella
Carub.0004s2156 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11572526-11582525 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367514 5261 Brassicaceae View MSA
123840523 5264 Brassicales-Malvales View MSA
124343888 5266 SBM View MSA
124236894 5268 Malvidae View MSA
124074285 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain