Gene : Carub.0004s2462 C. rubella v1.1
Defline:  (1 of 5) PTHR16223:SF29 - TRANSCRIPTION FACTOR BHLH117-RELATED Genomic Order:  2462
Name:  ? Carub.0004s2462 Secondary Identifier:  ? PAC:39236730
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2462 0.5kb upstream 0.5kb upstream 2750 true scaffold_4: 12750826-12753575 Capsella rubella
Carub.0004s2462 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12753076-12753575 Capsella rubella
Carub.0004s2462 0.5kb downstream 0.5kb downstream 2750 true scaffold_4: 12750326-12753075 Capsella rubella
Carub.0004s2462 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12750326-12750825 Capsella rubella
Carub.0004s2462 1.0kb upstream 1.0kb upstream 3250 true scaffold_4: 12750826-12754075 Capsella rubella
Carub.0004s2462 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12753076-12754075 Capsella rubella
Carub.0004s2462 1.0kb downstream 1.0kb downstream 3250 true scaffold_4: 12749826-12753075 Capsella rubella
Carub.0004s2462 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12749826-12750825 Capsella rubella
Carub.0004s2462 2.0kb upstream 2.0kb upstream 4250 true scaffold_4: 12750826-12755075 Capsella rubella
Carub.0004s2462 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12753076-12755075 Capsella rubella
Carub.0004s2462 2.0kb downstream 2.0kb downstream 4250 true scaffold_4: 12748826-12753075 Capsella rubella
Carub.0004s2462 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12748826-12750825 Capsella rubella
Carub.0004s2462 5.0kb upstream 5.0kb upstream 7250 true scaffold_4: 12750826-12758075 Capsella rubella
Carub.0004s2462 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12753076-12758075 Capsella rubella
Carub.0004s2462 5.0kb downstream 5.0kb downstream 7250 true scaffold_4: 12745826-12753075 Capsella rubella
Carub.0004s2462 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12745826-12750825 Capsella rubella
Carub.0004s2462 10.0kb upstream 10.0kb upstream 12250 true scaffold_4: 12750826-12763075 Capsella rubella
Carub.0004s2462 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12753076-12763075 Capsella rubella
Carub.0004s2462 10.0kb downstream 10.0kb downstream 12250 true scaffold_4: 12740826-12753075 Capsella rubella
Carub.0004s2462 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12740826-12750825 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367386 5261 Brassicaceae View MSA
123835699 5264 Brassicales-Malvales View MSA
124340682 5266 SBM View MSA
124252868 5268 Malvidae View MSA
124073794 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain