Gene : Carub.0004s2485 C. rubella v1.1
Defline:  (1 of 47) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  2485
Name:  ? Carub.0004s2485 Secondary Identifier:  ? PAC:39237229
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2485 0.5kb upstream 0.5kb upstream 1939 true scaffold_4: 12836560-12838498 Capsella rubella
Carub.0004s2485 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12837999-12838498 Capsella rubella
Carub.0004s2485 0.5kb downstream 0.5kb downstream 1939 true scaffold_4: 12836060-12837998 Capsella rubella
Carub.0004s2485 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12836060-12836559 Capsella rubella
Carub.0004s2485 1.0kb upstream 1.0kb upstream 2439 true scaffold_4: 12836560-12838998 Capsella rubella
Carub.0004s2485 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12837999-12838998 Capsella rubella
Carub.0004s2485 1.0kb downstream 1.0kb downstream 2439 true scaffold_4: 12835560-12837998 Capsella rubella
Carub.0004s2485 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12835560-12836559 Capsella rubella
Carub.0004s2485 2.0kb upstream 2.0kb upstream 3439 true scaffold_4: 12836560-12839998 Capsella rubella
Carub.0004s2485 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12837999-12839998 Capsella rubella
Carub.0004s2485 2.0kb downstream 2.0kb downstream 3439 true scaffold_4: 12834560-12837998 Capsella rubella
Carub.0004s2485 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12834560-12836559 Capsella rubella
Carub.0004s2485 5.0kb upstream 5.0kb upstream 6439 true scaffold_4: 12836560-12842998 Capsella rubella
Carub.0004s2485 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12837999-12842998 Capsella rubella
Carub.0004s2485 5.0kb downstream 5.0kb downstream 6439 true scaffold_4: 12831560-12837998 Capsella rubella
Carub.0004s2485 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12831560-12836559 Capsella rubella
Carub.0004s2485 10.0kb upstream 10.0kb upstream 11439 true scaffold_4: 12836560-12847998 Capsella rubella
Carub.0004s2485 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12837999-12847998 Capsella rubella
Carub.0004s2485 10.0kb downstream 10.0kb downstream 11439 true scaffold_4: 12826560-12837998 Capsella rubella
Carub.0004s2485 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12826560-12836559 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122380453 5261 Brassicaceae View MSA
123802723 5264 Brassicales-Malvales View MSA
124299893 5266 SBM View MSA
124151197 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain