Gene : Carub.0004s2477 C. rubella v1.1
Defline:  (1 of 2) PTHR13301//PTHR13301:SF69 - X-BOX TRANSCRIPTION FACTOR-RELATED // BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  2477
Name:  ? Carub.0004s2477 Secondary Identifier:  ? PAC:39237710
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2477 0.5kb upstream 0.5kb upstream 2929 true scaffold_4: 12807273-12810201 Capsella rubella
Carub.0004s2477 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12809702-12810201 Capsella rubella
Carub.0004s2477 0.5kb downstream 0.5kb downstream 2929 true scaffold_4: 12806773-12809701 Capsella rubella
Carub.0004s2477 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12806773-12807272 Capsella rubella
Carub.0004s2477 1.0kb upstream 1.0kb upstream 3429 true scaffold_4: 12807273-12810701 Capsella rubella
Carub.0004s2477 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12809702-12810701 Capsella rubella
Carub.0004s2477 1.0kb downstream 1.0kb downstream 3429 true scaffold_4: 12806273-12809701 Capsella rubella
Carub.0004s2477 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12806273-12807272 Capsella rubella
Carub.0004s2477 2.0kb upstream 2.0kb upstream 4429 true scaffold_4: 12807273-12811701 Capsella rubella
Carub.0004s2477 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12809702-12811701 Capsella rubella
Carub.0004s2477 2.0kb downstream 2.0kb downstream 4429 true scaffold_4: 12805273-12809701 Capsella rubella
Carub.0004s2477 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12805273-12807272 Capsella rubella
Carub.0004s2477 5.0kb upstream 5.0kb upstream 7429 true scaffold_4: 12807273-12814701 Capsella rubella
Carub.0004s2477 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12809702-12814701 Capsella rubella
Carub.0004s2477 5.0kb downstream 5.0kb downstream 7429 true scaffold_4: 12802273-12809701 Capsella rubella
Carub.0004s2477 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12802273-12807272 Capsella rubella
Carub.0004s2477 10.0kb upstream 10.0kb upstream 12429 true scaffold_4: 12807273-12819701 Capsella rubella
Carub.0004s2477 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12809702-12819701 Capsella rubella
Carub.0004s2477 10.0kb downstream 10.0kb downstream 12429 true scaffold_4: 12797273-12809701 Capsella rubella
Carub.0004s2477 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12797273-12807272 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377654 5261 Brassicaceae View MSA
123837238 5264 Brassicales-Malvales View MSA
124347537 5266 SBM View MSA
124249708 5268 Malvidae View MSA
124069562 5270 Rosid View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain