Gene : Carub.0004s2505 C. rubella v1.1
Defline:  (1 of 5) 4.1.1.31 - Phosphoenolpyruvate carboxylase / Phosphoenolpyruvic carboxylase Genomic Order:  2505
Name:  ? Carub.0004s2505 Secondary Identifier:  ? PAC:39238205
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-241 Capsella rubella pathologic  
Crubella PWY-6549 Capsella rubella pathologic  
Crubella PWY-7115 Capsella rubella pathologic  
Crubella PWY-7117 Capsella rubella pathologic  
Crubella PWYQT-4429 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2505 0.5kb upstream 0.5kb upstream 5202 true scaffold_4: 12904767-12909968 Capsella rubella
Carub.0004s2505 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12909469-12909968 Capsella rubella
Carub.0004s2505 0.5kb downstream 0.5kb downstream 5202 true scaffold_4: 12904267-12909468 Capsella rubella
Carub.0004s2505 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12904267-12904766 Capsella rubella
Carub.0004s2505 1.0kb upstream 1.0kb upstream 5702 true scaffold_4: 12904767-12910468 Capsella rubella
Carub.0004s2505 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12909469-12910468 Capsella rubella
Carub.0004s2505 1.0kb downstream 1.0kb downstream 5702 true scaffold_4: 12903767-12909468 Capsella rubella
Carub.0004s2505 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12903767-12904766 Capsella rubella
Carub.0004s2505 2.0kb upstream 2.0kb upstream 6702 true scaffold_4: 12904767-12911468 Capsella rubella
Carub.0004s2505 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12909469-12911468 Capsella rubella
Carub.0004s2505 2.0kb downstream 2.0kb downstream 6702 true scaffold_4: 12902767-12909468 Capsella rubella
Carub.0004s2505 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12902767-12904766 Capsella rubella
Carub.0004s2505 5.0kb upstream 5.0kb upstream 9702 true scaffold_4: 12904767-12914468 Capsella rubella
Carub.0004s2505 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12909469-12914468 Capsella rubella
Carub.0004s2505 5.0kb downstream 5.0kb downstream 9702 true scaffold_4: 12899767-12909468 Capsella rubella
Carub.0004s2505 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12899767-12904766 Capsella rubella
Carub.0004s2505 10.0kb upstream 10.0kb upstream 14702 true scaffold_4: 12904767-12919468 Capsella rubella
Carub.0004s2505 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12909469-12919468 Capsella rubella
Carub.0004s2505 10.0kb downstream 10.0kb downstream 14702 true scaffold_4: 12894767-12909468 Capsella rubella
Carub.0004s2505 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12894767-12904766 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376636 5261 Brassicaceae View MSA
123801315 5264 Brassicales-Malvales View MSA
124349532 5266 SBM View MSA
124239034 5268 Malvidae View MSA
124070738 5270 Rosid View MSA
123746119 5271 Pentapetalae View MSA
122795161 5272 Eudicot View MSA
122043424 5273 Angiosperm View MSA
123429064 5275 Viridiplantae View MSA
121350778 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain