Gene : Carub.0004s2550 C. rubella v1.1
Defline:  (1 of 3) K17839 - polyamine oxidase (PAO4, PAO3, PAO2) Genomic Order:  2550
Name:  ? Carub.0004s2550 Secondary Identifier:  ? PAC:39238308
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6441 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2550 0.5kb upstream 0.5kb upstream 3131 true scaffold_4: 13074481-13077611 Capsella rubella
Carub.0004s2550 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13074481-13074980 Capsella rubella
Carub.0004s2550 0.5kb downstream 0.5kb downstream 3131 true scaffold_4: 13074981-13078111 Capsella rubella
Carub.0004s2550 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13077612-13078111 Capsella rubella
Carub.0004s2550 1.0kb upstream 1.0kb upstream 3631 true scaffold_4: 13073981-13077611 Capsella rubella
Carub.0004s2550 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13073981-13074980 Capsella rubella
Carub.0004s2550 1.0kb downstream 1.0kb downstream 3631 true scaffold_4: 13074981-13078611 Capsella rubella
Carub.0004s2550 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13077612-13078611 Capsella rubella
Carub.0004s2550 2.0kb upstream 2.0kb upstream 4631 true scaffold_4: 13072981-13077611 Capsella rubella
Carub.0004s2550 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13072981-13074980 Capsella rubella
Carub.0004s2550 2.0kb downstream 2.0kb downstream 4631 true scaffold_4: 13074981-13079611 Capsella rubella
Carub.0004s2550 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13077612-13079611 Capsella rubella
Carub.0004s2550 5.0kb upstream 5.0kb upstream 7631 true scaffold_4: 13069981-13077611 Capsella rubella
Carub.0004s2550 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13069981-13074980 Capsella rubella
Carub.0004s2550 5.0kb downstream 5.0kb downstream 7631 true scaffold_4: 13074981-13082611 Capsella rubella
Carub.0004s2550 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13077612-13082611 Capsella rubella
Carub.0004s2550 10.0kb upstream 10.0kb upstream 12631 true scaffold_4: 13064981-13077611 Capsella rubella
Carub.0004s2550 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13064981-13074980 Capsella rubella
Carub.0004s2550 10.0kb downstream 10.0kb downstream 12631 true scaffold_4: 13074981-13087611 Capsella rubella
Carub.0004s2550 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13077612-13087611 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373356 5261 Brassicaceae View MSA
123831271 5264 Brassicales-Malvales View MSA
124342575 5266 SBM View MSA
124244923 5268 Malvidae View MSA
124065173 5270 Rosid View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain