Gene : Carub.0004s2337 C. rubella v1.1
Defline:  (1 of 2) PTHR16201:SF34 - LYSOSOMAL AMINO ACID TRANSPORTER 1 Genomic Order:  2337
Name:  ? Carub.0004s2337 Secondary Identifier:  ? PAC:39235992
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2337 0.5kb upstream 0.5kb upstream 2876 true scaffold_4: 12271312-12274187 Capsella rubella
Carub.0004s2337 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12273688-12274187 Capsella rubella
Carub.0004s2337 0.5kb downstream 0.5kb downstream 2876 true scaffold_4: 12270812-12273687 Capsella rubella
Carub.0004s2337 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12270812-12271311 Capsella rubella
Carub.0004s2337 1.0kb upstream 1.0kb upstream 3376 true scaffold_4: 12271312-12274687 Capsella rubella
Carub.0004s2337 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12273688-12274687 Capsella rubella
Carub.0004s2337 1.0kb downstream 1.0kb downstream 3376 true scaffold_4: 12270312-12273687 Capsella rubella
Carub.0004s2337 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12270312-12271311 Capsella rubella
Carub.0004s2337 2.0kb upstream 2.0kb upstream 4376 true scaffold_4: 12271312-12275687 Capsella rubella
Carub.0004s2337 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12273688-12275687 Capsella rubella
Carub.0004s2337 2.0kb downstream 2.0kb downstream 4376 true scaffold_4: 12269312-12273687 Capsella rubella
Carub.0004s2337 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12269312-12271311 Capsella rubella
Carub.0004s2337 5.0kb upstream 5.0kb upstream 7376 true scaffold_4: 12271312-12278687 Capsella rubella
Carub.0004s2337 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12273688-12278687 Capsella rubella
Carub.0004s2337 5.0kb downstream 5.0kb downstream 7376 true scaffold_4: 12266312-12273687 Capsella rubella
Carub.0004s2337 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12266312-12271311 Capsella rubella
Carub.0004s2337 10.0kb upstream 10.0kb upstream 12376 true scaffold_4: 12271312-12283687 Capsella rubella
Carub.0004s2337 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12273688-12283687 Capsella rubella
Carub.0004s2337 10.0kb downstream 10.0kb downstream 12376 true scaffold_4: 12261312-12273687 Capsella rubella
Carub.0004s2337 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12261312-12271311 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360499 5261 Brassicaceae View MSA
123831425 5264 Brassicales-Malvales View MSA
124337440 5266 SBM View MSA
124247637 5268 Malvidae View MSA
124071732 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain