Gene : Carub.0004s2352 C. rubella v1.1
Defline:  (1 of 2) PTHR23086//PTHR23086:SF37 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE // PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 4-RELATED Genomic Order:  2352
Name:  ? Carub.0004s2352 Secondary Identifier:  ? PAC:39238746
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6351 Capsella rubella pathologic  
Crubella PWY-6352 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2352 0.5kb upstream 0.5kb upstream 4063 true scaffold_4: 12323419-12327481 Capsella rubella
Carub.0004s2352 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12323419-12323918 Capsella rubella
Carub.0004s2352 0.5kb downstream 0.5kb downstream 4063 true scaffold_4: 12323919-12327981 Capsella rubella
Carub.0004s2352 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12327482-12327981 Capsella rubella
Carub.0004s2352 1.0kb upstream 1.0kb upstream 4563 true scaffold_4: 12322919-12327481 Capsella rubella
Carub.0004s2352 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12322919-12323918 Capsella rubella
Carub.0004s2352 1.0kb downstream 1.0kb downstream 4563 true scaffold_4: 12323919-12328481 Capsella rubella
Carub.0004s2352 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12327482-12328481 Capsella rubella
Carub.0004s2352 2.0kb upstream 2.0kb upstream 5563 true scaffold_4: 12321919-12327481 Capsella rubella
Carub.0004s2352 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12321919-12323918 Capsella rubella
Carub.0004s2352 2.0kb downstream 2.0kb downstream 5563 true scaffold_4: 12323919-12329481 Capsella rubella
Carub.0004s2352 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12327482-12329481 Capsella rubella
Carub.0004s2352 5.0kb upstream 5.0kb upstream 8563 true scaffold_4: 12318919-12327481 Capsella rubella
Carub.0004s2352 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12318919-12323918 Capsella rubella
Carub.0004s2352 5.0kb downstream 5.0kb downstream 8563 true scaffold_4: 12323919-12332481 Capsella rubella
Carub.0004s2352 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12327482-12332481 Capsella rubella
Carub.0004s2352 10.0kb upstream 10.0kb upstream 13563 true scaffold_4: 12313919-12327481 Capsella rubella
Carub.0004s2352 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12313919-12323918 Capsella rubella
Carub.0004s2352 10.0kb downstream 10.0kb downstream 13563 true scaffold_4: 12323919-12337481 Capsella rubella
Carub.0004s2352 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12327482-12337481 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371417 5261 Brassicaceae View MSA
123839827 5264 Brassicales-Malvales View MSA
124340545 5266 SBM View MSA
124242521 5268 Malvidae View MSA
124073684 5270 Rosid View MSA
123747330 5271 Pentapetalae View MSA
122788169 5272 Eudicot View MSA
122047903 5273 Angiosperm View MSA
121310813 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain