Gene : Carub.0004s2364 C. rubella v1.1
Genomic Order:  2364 Name:  ? Carub.0004s2364
Secondary Identifier:  ? PAC:39237041
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2364 0.5kb upstream 0.5kb upstream 737 true scaffold_4: 12383350-12384086 Capsella rubella
Carub.0004s2364 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12383587-12384086 Capsella rubella
Carub.0004s2364 0.5kb downstream 0.5kb downstream 737 true scaffold_4: 12382850-12383586 Capsella rubella
Carub.0004s2364 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12382850-12383349 Capsella rubella
Carub.0004s2364 1.0kb upstream 1.0kb upstream 1237 true scaffold_4: 12383350-12384586 Capsella rubella
Carub.0004s2364 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12383587-12384586 Capsella rubella
Carub.0004s2364 1.0kb downstream 1.0kb downstream 1237 true scaffold_4: 12382350-12383586 Capsella rubella
Carub.0004s2364 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12382350-12383349 Capsella rubella
Carub.0004s2364 2.0kb upstream 2.0kb upstream 2237 true scaffold_4: 12383350-12385586 Capsella rubella
Carub.0004s2364 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12383587-12385586 Capsella rubella
Carub.0004s2364 2.0kb downstream 2.0kb downstream 2237 true scaffold_4: 12381350-12383586 Capsella rubella
Carub.0004s2364 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12381350-12383349 Capsella rubella
Carub.0004s2364 5.0kb upstream 5.0kb upstream 5237 true scaffold_4: 12383350-12388586 Capsella rubella
Carub.0004s2364 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12383587-12388586 Capsella rubella
Carub.0004s2364 5.0kb downstream 5.0kb downstream 5237 true scaffold_4: 12378350-12383586 Capsella rubella
Carub.0004s2364 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12378350-12383349 Capsella rubella
Carub.0004s2364 10.0kb upstream 10.0kb upstream 10237 true scaffold_4: 12383350-12393586 Capsella rubella
Carub.0004s2364 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12383587-12393586 Capsella rubella
Carub.0004s2364 10.0kb downstream 10.0kb downstream 10237 true scaffold_4: 12373350-12383586 Capsella rubella
Carub.0004s2364 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12373350-12383349 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779228 5273 Angiosperm View MSA
122375769 5261 Brassicaceae View MSA
123801049 5264 Brassicales-Malvales View MSA
124298394 5266 SBM View MSA
124150047 5268 Malvidae View MSA
124064447 5270 Rosid View MSA
123741259 5271 Pentapetalae View MSA
122770024 5272 Eudicot View MSA
121050904 5274 Embryophyte View MSA
123091016 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain