Gene : Carub.0004s2368 C. rubella v1.1

Defline:  (1 of 6) K14508 - regulatory protein NPR1 (NPR1) Genomic Order:  2368
Name:  ? Carub.0004s2368 Secondary Identifier:  ? PAC:39237455

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2368 0.5kb upstream 0.5kb upstream 3128 true scaffold_4: 12394842-12397969 Capsella rubella
Carub.0004s2368 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12397470-12397969 Capsella rubella
Carub.0004s2368 0.5kb downstream 0.5kb downstream 3128 true scaffold_4: 12394342-12397469 Capsella rubella
Carub.0004s2368 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12394342-12394841 Capsella rubella
Carub.0004s2368 1.0kb upstream 1.0kb upstream 3628 true scaffold_4: 12394842-12398469 Capsella rubella
Carub.0004s2368 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12397470-12398469 Capsella rubella
Carub.0004s2368 1.0kb downstream 1.0kb downstream 3628 true scaffold_4: 12393842-12397469 Capsella rubella
Carub.0004s2368 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12393842-12394841 Capsella rubella
Carub.0004s2368 2.0kb upstream 2.0kb upstream 4628 true scaffold_4: 12394842-12399469 Capsella rubella
Carub.0004s2368 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12397470-12399469 Capsella rubella
Carub.0004s2368 2.0kb downstream 2.0kb downstream 4628 true scaffold_4: 12392842-12397469 Capsella rubella
Carub.0004s2368 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12392842-12394841 Capsella rubella
Carub.0004s2368 5.0kb upstream 5.0kb upstream 7628 true scaffold_4: 12394842-12402469 Capsella rubella
Carub.0004s2368 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12397470-12402469 Capsella rubella
Carub.0004s2368 5.0kb downstream 5.0kb downstream 7628 true scaffold_4: 12389842-12397469 Capsella rubella
Carub.0004s2368 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12389842-12394841 Capsella rubella
Carub.0004s2368 10.0kb upstream 10.0kb upstream 12628 true scaffold_4: 12394842-12407469 Capsella rubella
Carub.0004s2368 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12397470-12407469 Capsella rubella
Carub.0004s2368 10.0kb downstream 10.0kb downstream 12628 true scaffold_4: 12384842-12397469 Capsella rubella
Carub.0004s2368 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12384842-12394841 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379111 5261 Brassicaceae View MSA
123835298 5264 Brassicales-Malvales View MSA
124341428 5266 SBM View MSA
124239709 5268 Malvidae View MSA
124068083 5270 Rosid View MSA
123743469 5271 Pentapetalae View MSA
122790802 5272 Eudicot View MSA
122046823 5273 Angiosperm View MSA
121349965 5274 Embryophyte View MSA
123381520 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain