Gene : Carub.0004s2397 C. rubella v1.1
Defline:  (1 of 1) PTHR19229//PTHR19229:SF36 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA // PROTEIN ABT-4 Genomic Order:  2397
Name:  ? Carub.0004s2397 Secondary Identifier:  ? PAC:39237254
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2397 0.5kb upstream 0.5kb upstream 13879 true scaffold_4: 12509948-12523826 Capsella rubella
Carub.0004s2397 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12523327-12523826 Capsella rubella
Carub.0004s2397 0.5kb downstream 0.5kb downstream 13879 true scaffold_4: 12509448-12523326 Capsella rubella
Carub.0004s2397 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12509448-12509947 Capsella rubella
Carub.0004s2397 1.0kb upstream 1.0kb upstream 14379 true scaffold_4: 12509948-12524326 Capsella rubella
Carub.0004s2397 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12523327-12524326 Capsella rubella
Carub.0004s2397 1.0kb downstream 1.0kb downstream 14379 true scaffold_4: 12508948-12523326 Capsella rubella
Carub.0004s2397 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12508948-12509947 Capsella rubella
Carub.0004s2397 2.0kb upstream 2.0kb upstream 15379 true scaffold_4: 12509948-12525326 Capsella rubella
Carub.0004s2397 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12523327-12525326 Capsella rubella
Carub.0004s2397 2.0kb downstream 2.0kb downstream 15379 true scaffold_4: 12507948-12523326 Capsella rubella
Carub.0004s2397 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12507948-12509947 Capsella rubella
Carub.0004s2397 5.0kb upstream 5.0kb upstream 18379 true scaffold_4: 12509948-12528326 Capsella rubella
Carub.0004s2397 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12523327-12528326 Capsella rubella
Carub.0004s2397 5.0kb downstream 5.0kb downstream 18379 true scaffold_4: 12504948-12523326 Capsella rubella
Carub.0004s2397 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12504948-12509947 Capsella rubella
Carub.0004s2397 10.0kb upstream 10.0kb upstream 23379 true scaffold_4: 12509948-12533326 Capsella rubella
Carub.0004s2397 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12523327-12533326 Capsella rubella
Carub.0004s2397 10.0kb downstream 10.0kb downstream 23379 true scaffold_4: 12499948-12523326 Capsella rubella
Carub.0004s2397 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12499948-12509947 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375185 5261 Brassicaceae View MSA
123834481 5264 Brassicales-Malvales View MSA
124339945 5266 SBM View MSA
124240909 5268 Malvidae View MSA
124064857 5270 Rosid View MSA
123738879 5271 Pentapetalae View MSA
122790700 5272 Eudicot View MSA
122047713 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121345531 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain