Gene : Carub.0004s2391 C. rubella v1.1

Defline:  (1 of 1) PTHR31696:SF14 - PROTEIN MIZU-KUSSEI 1 Genomic Order:  2391
Name:  ? Carub.0004s2391 Secondary Identifier:  ? PAC:39239062

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2391 0.5kb upstream 0.5kb upstream 1403 true scaffold_4: 12486451-12487853 Capsella rubella
Carub.0004s2391 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12486451-12486950 Capsella rubella
Carub.0004s2391 0.5kb downstream 0.5kb downstream 1403 true scaffold_4: 12486951-12488353 Capsella rubella
Carub.0004s2391 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12487854-12488353 Capsella rubella
Carub.0004s2391 1.0kb upstream 1.0kb upstream 1903 true scaffold_4: 12485951-12487853 Capsella rubella
Carub.0004s2391 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12485951-12486950 Capsella rubella
Carub.0004s2391 1.0kb downstream 1.0kb downstream 1903 true scaffold_4: 12486951-12488853 Capsella rubella
Carub.0004s2391 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12487854-12488853 Capsella rubella
Carub.0004s2391 2.0kb upstream 2.0kb upstream 2903 true scaffold_4: 12484951-12487853 Capsella rubella
Carub.0004s2391 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12484951-12486950 Capsella rubella
Carub.0004s2391 2.0kb downstream 2.0kb downstream 2903 true scaffold_4: 12486951-12489853 Capsella rubella
Carub.0004s2391 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12487854-12489853 Capsella rubella
Carub.0004s2391 5.0kb upstream 5.0kb upstream 5903 true scaffold_4: 12481951-12487853 Capsella rubella
Carub.0004s2391 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12481951-12486950 Capsella rubella
Carub.0004s2391 5.0kb downstream 5.0kb downstream 5903 true scaffold_4: 12486951-12492853 Capsella rubella
Carub.0004s2391 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12487854-12492853 Capsella rubella
Carub.0004s2391 10.0kb upstream 10.0kb upstream 10903 true scaffold_4: 12476951-12487853 Capsella rubella
Carub.0004s2391 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12476951-12486950 Capsella rubella
Carub.0004s2391 10.0kb downstream 10.0kb downstream 10903 true scaffold_4: 12486951-12497853 Capsella rubella
Carub.0004s2391 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12487854-12497853 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363121 5261 Brassicaceae View MSA
123840365 5264 Brassicales-Malvales View MSA
124338064 5266 SBM View MSA
124243511 5268 Malvidae View MSA
124068975 5270 Rosid View MSA
123753041 5271 Pentapetalae View MSA
122795170 5272 Eudicot View MSA
122050120 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain