Gene : Carub.0004s2698 C. rubella v1.1
Defline:  (1 of 1) PTHR13871//PTHR13871:SF46 - THIOREDOXIN // CYSTEINE/HISTIDINE-RICH C1 DOMAIN-CONTAINING PROTEIN Genomic Order:  2698
Name:  ? Carub.0004s2698 Secondary Identifier:  ? PAC:39238755
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2698 0.5kb upstream 0.5kb upstream 1463 true scaffold_4: 13553260-13554722 Capsella rubella
Carub.0004s2698 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13553260-13553759 Capsella rubella
Carub.0004s2698 0.5kb downstream 0.5kb downstream 1463 true scaffold_4: 13553760-13555222 Capsella rubella
Carub.0004s2698 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13554723-13555222 Capsella rubella
Carub.0004s2698 1.0kb upstream 1.0kb upstream 1963 true scaffold_4: 13552760-13554722 Capsella rubella
Carub.0004s2698 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13552760-13553759 Capsella rubella
Carub.0004s2698 1.0kb downstream 1.0kb downstream 1963 true scaffold_4: 13553760-13555722 Capsella rubella
Carub.0004s2698 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13554723-13555722 Capsella rubella
Carub.0004s2698 2.0kb upstream 2.0kb upstream 2963 true scaffold_4: 13551760-13554722 Capsella rubella
Carub.0004s2698 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13551760-13553759 Capsella rubella
Carub.0004s2698 2.0kb downstream 2.0kb downstream 2963 true scaffold_4: 13553760-13556722 Capsella rubella
Carub.0004s2698 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13554723-13556722 Capsella rubella
Carub.0004s2698 5.0kb upstream 5.0kb upstream 5963 true scaffold_4: 13548760-13554722 Capsella rubella
Carub.0004s2698 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13548760-13553759 Capsella rubella
Carub.0004s2698 5.0kb downstream 5.0kb downstream 5963 true scaffold_4: 13553760-13559722 Capsella rubella
Carub.0004s2698 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13554723-13559722 Capsella rubella
Carub.0004s2698 10.0kb upstream 10.0kb upstream 10963 true scaffold_4: 13543760-13554722 Capsella rubella
Carub.0004s2698 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13543760-13553759 Capsella rubella
Carub.0004s2698 10.0kb downstream 10.0kb downstream 10963 true scaffold_4: 13553760-13564722 Capsella rubella
Carub.0004s2698 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13554723-13564722 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368989 5261 Brassicaceae View MSA
123827692 5264 Brassicales-Malvales View MSA
124343550 5266 SBM View MSA
124239501 5268 Malvidae View MSA
124074653 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain