Gene : Carub.0004s2728 C. rubella v1.1
Defline:  (1 of 2) PTHR31307:SF3 - ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE PROTEIN Genomic Order:  2728
Name:  ? Carub.0004s2728 Secondary Identifier:  ? PAC:39238250
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2728 0.5kb upstream 0.5kb upstream 1688 true scaffold_4: 13654799-13656486 Capsella rubella
Carub.0004s2728 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13655987-13656486 Capsella rubella
Carub.0004s2728 0.5kb downstream 0.5kb downstream 1688 true scaffold_4: 13654299-13655986 Capsella rubella
Carub.0004s2728 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13654299-13654798 Capsella rubella
Carub.0004s2728 1.0kb upstream 1.0kb upstream 2188 true scaffold_4: 13654799-13656986 Capsella rubella
Carub.0004s2728 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13655987-13656986 Capsella rubella
Carub.0004s2728 1.0kb downstream 1.0kb downstream 2188 true scaffold_4: 13653799-13655986 Capsella rubella
Carub.0004s2728 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13653799-13654798 Capsella rubella
Carub.0004s2728 2.0kb upstream 2.0kb upstream 3188 true scaffold_4: 13654799-13657986 Capsella rubella
Carub.0004s2728 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13655987-13657986 Capsella rubella
Carub.0004s2728 2.0kb downstream 2.0kb downstream 3188 true scaffold_4: 13652799-13655986 Capsella rubella
Carub.0004s2728 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13652799-13654798 Capsella rubella
Carub.0004s2728 5.0kb upstream 5.0kb upstream 6188 true scaffold_4: 13654799-13660986 Capsella rubella
Carub.0004s2728 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13655987-13660986 Capsella rubella
Carub.0004s2728 5.0kb downstream 5.0kb downstream 6188 true scaffold_4: 13649799-13655986 Capsella rubella
Carub.0004s2728 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13649799-13654798 Capsella rubella
Carub.0004s2728 10.0kb upstream 10.0kb upstream 11188 true scaffold_4: 13654799-13665986 Capsella rubella
Carub.0004s2728 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13655987-13665986 Capsella rubella
Carub.0004s2728 10.0kb downstream 10.0kb downstream 11188 true scaffold_4: 13644799-13655986 Capsella rubella
Carub.0004s2728 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13644799-13654798 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370961 5261 Brassicaceae View MSA
123830764 5264 Brassicales-Malvales View MSA
124339418 5266 SBM View MSA
124251830 5268 Malvidae View MSA
124069508 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain