Gene : Carub.0004s2771 C. rubella v1.1
Defline:  (1 of 4) PTHR26374//PTHR26374:SF175 - FAMILY NOT NAMED // C2H2-LIKE ZINC FINGER PROTEIN-RELATED Genomic Order:  2771
Name:  ? Carub.0004s2771 Secondary Identifier:  ? PAC:39237657
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2771 0.5kb upstream 0.5kb upstream 1853 true scaffold_4: 13829702-13831554 Capsella rubella
Carub.0004s2771 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13829702-13830201 Capsella rubella
Carub.0004s2771 0.5kb downstream 0.5kb downstream 1853 true scaffold_4: 13830202-13832054 Capsella rubella
Carub.0004s2771 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13831555-13832054 Capsella rubella
Carub.0004s2771 1.0kb upstream 1.0kb upstream 2353 true scaffold_4: 13829202-13831554 Capsella rubella
Carub.0004s2771 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13829202-13830201 Capsella rubella
Carub.0004s2771 1.0kb downstream 1.0kb downstream 2353 true scaffold_4: 13830202-13832554 Capsella rubella
Carub.0004s2771 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13831555-13832554 Capsella rubella
Carub.0004s2771 2.0kb upstream 2.0kb upstream 3353 true scaffold_4: 13828202-13831554 Capsella rubella
Carub.0004s2771 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13828202-13830201 Capsella rubella
Carub.0004s2771 2.0kb downstream 2.0kb downstream 3353 true scaffold_4: 13830202-13833554 Capsella rubella
Carub.0004s2771 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13831555-13833554 Capsella rubella
Carub.0004s2771 5.0kb upstream 5.0kb upstream 6353 true scaffold_4: 13825202-13831554 Capsella rubella
Carub.0004s2771 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13825202-13830201 Capsella rubella
Carub.0004s2771 5.0kb downstream 5.0kb downstream 6353 true scaffold_4: 13830202-13836554 Capsella rubella
Carub.0004s2771 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13831555-13836554 Capsella rubella
Carub.0004s2771 10.0kb upstream 10.0kb upstream 11353 true scaffold_4: 13820202-13831554 Capsella rubella
Carub.0004s2771 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13820202-13830201 Capsella rubella
Carub.0004s2771 10.0kb downstream 10.0kb downstream 11353 true scaffold_4: 13830202-13841554 Capsella rubella
Carub.0004s2771 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13831555-13841554 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376679 5261 Brassicaceae View MSA
123839100 5264 Brassicales-Malvales View MSA
124347176 5266 SBM View MSA
124250406 5268 Malvidae View MSA
124072533 5270 Rosid View MSA
123753327 5271 Pentapetalae View MSA
122797874 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain