Gene : Carub.0004s2623 C. rubella v1.1

Defline:  (1 of 13) PTHR27007//PTHR27007:SF13 - FAMILY NOT NAMED // L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-RELATED Genomic Order:  2623
Name:  ? Carub.0004s2623 Secondary Identifier:  ? PAC:39236907

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2623 0.5kb upstream 0.5kb upstream 3375 true scaffold_4: 13318696-13322070 Capsella rubella
Carub.0004s2623 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13318696-13319195 Capsella rubella
Carub.0004s2623 0.5kb downstream 0.5kb downstream 3375 true scaffold_4: 13319196-13322570 Capsella rubella
Carub.0004s2623 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13322071-13322570 Capsella rubella
Carub.0004s2623 1.0kb upstream 1.0kb upstream 3875 true scaffold_4: 13318196-13322070 Capsella rubella
Carub.0004s2623 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13318196-13319195 Capsella rubella
Carub.0004s2623 1.0kb downstream 1.0kb downstream 3875 true scaffold_4: 13319196-13323070 Capsella rubella
Carub.0004s2623 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13322071-13323070 Capsella rubella
Carub.0004s2623 2.0kb upstream 2.0kb upstream 4875 true scaffold_4: 13317196-13322070 Capsella rubella
Carub.0004s2623 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13317196-13319195 Capsella rubella
Carub.0004s2623 2.0kb downstream 2.0kb downstream 4875 true scaffold_4: 13319196-13324070 Capsella rubella
Carub.0004s2623 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13322071-13324070 Capsella rubella
Carub.0004s2623 5.0kb upstream 5.0kb upstream 7875 true scaffold_4: 13314196-13322070 Capsella rubella
Carub.0004s2623 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13314196-13319195 Capsella rubella
Carub.0004s2623 5.0kb downstream 5.0kb downstream 7875 true scaffold_4: 13319196-13327070 Capsella rubella
Carub.0004s2623 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13322071-13327070 Capsella rubella
Carub.0004s2623 10.0kb upstream 10.0kb upstream 12875 true scaffold_4: 13309196-13322070 Capsella rubella
Carub.0004s2623 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13309196-13319195 Capsella rubella
Carub.0004s2623 10.0kb downstream 10.0kb downstream 12875 true scaffold_4: 13319196-13332070 Capsella rubella
Carub.0004s2623 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13322071-13332070 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376897 5261 Brassicaceae View MSA
123840664 5264 Brassicales-Malvales View MSA
124322765 5266 SBM View MSA
124252273 5268 Malvidae View MSA
124050183 5270 Rosid View MSA
123746397 5271 Pentapetalae View MSA
122771896 5272 Eudicot View MSA
122049329 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain