Gene : Carub.0004s2648 C. rubella v1.1
Defline:  (1 of 3) 2.1.1.165 - Methyl halide transferase / Methyl chloride transferase Genomic Order:  2648
Name:  ? Carub.0004s2648 Secondary Identifier:  ? PAC:39237976
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6730 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2648 0.5kb upstream 0.5kb upstream 2498 true scaffold_4: 13403666-13406163 Capsella rubella
Carub.0004s2648 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13405664-13406163 Capsella rubella
Carub.0004s2648 0.5kb downstream 0.5kb downstream 2498 true scaffold_4: 13403166-13405663 Capsella rubella
Carub.0004s2648 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13403166-13403665 Capsella rubella
Carub.0004s2648 1.0kb upstream 1.0kb upstream 2998 true scaffold_4: 13403666-13406663 Capsella rubella
Carub.0004s2648 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13405664-13406663 Capsella rubella
Carub.0004s2648 1.0kb downstream 1.0kb downstream 2998 true scaffold_4: 13402666-13405663 Capsella rubella
Carub.0004s2648 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13402666-13403665 Capsella rubella
Carub.0004s2648 2.0kb upstream 2.0kb upstream 3998 true scaffold_4: 13403666-13407663 Capsella rubella
Carub.0004s2648 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13405664-13407663 Capsella rubella
Carub.0004s2648 2.0kb downstream 2.0kb downstream 3998 true scaffold_4: 13401666-13405663 Capsella rubella
Carub.0004s2648 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13401666-13403665 Capsella rubella
Carub.0004s2648 5.0kb upstream 5.0kb upstream 6998 true scaffold_4: 13403666-13410663 Capsella rubella
Carub.0004s2648 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13405664-13410663 Capsella rubella
Carub.0004s2648 5.0kb downstream 5.0kb downstream 6998 true scaffold_4: 13398666-13405663 Capsella rubella
Carub.0004s2648 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13398666-13403665 Capsella rubella
Carub.0004s2648 10.0kb upstream 10.0kb upstream 11998 true scaffold_4: 13403666-13415663 Capsella rubella
Carub.0004s2648 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13405664-13415663 Capsella rubella
Carub.0004s2648 10.0kb downstream 10.0kb downstream 11998 true scaffold_4: 13393666-13405663 Capsella rubella
Carub.0004s2648 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13393666-13403665 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040998 5273 Angiosperm View MSA
122379294 5261 Brassicaceae View MSA
123802194 5264 Brassicales-Malvales View MSA
124299408 5266 SBM View MSA
124249928 5268 Malvidae View MSA
124062480 5270 Rosid View MSA
123741516 5271 Pentapetalae View MSA
122787358 5272 Eudicot View MSA
121346954 5274 Embryophyte View MSA
123424412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain