Gene : Carub.0004s2654 C. rubella v1.1
Defline:  (1 of 1) PTHR14217//PTHR14217:SF1 - FAMILY NOT NAMED // INOSITOL-TETRAKISPHOSPHATE 1-KINASE Genomic Order:  2654
Name:  ? Carub.0004s2654 Secondary Identifier:  ? PAC:39238077
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6365 Capsella rubella pathologic  
Crubella PWY-6366 Capsella rubella pathologic  
Crubella PWY-6554 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2654 0.5kb upstream 0.5kb upstream 3759 true scaffold_4: 13418895-13422653 Capsella rubella
Carub.0004s2654 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13422154-13422653 Capsella rubella
Carub.0004s2654 0.5kb downstream 0.5kb downstream 3759 true scaffold_4: 13418395-13422153 Capsella rubella
Carub.0004s2654 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13418395-13418894 Capsella rubella
Carub.0004s2654 1.0kb upstream 1.0kb upstream 4259 true scaffold_4: 13418895-13423153 Capsella rubella
Carub.0004s2654 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13422154-13423153 Capsella rubella
Carub.0004s2654 1.0kb downstream 1.0kb downstream 4259 true scaffold_4: 13417895-13422153 Capsella rubella
Carub.0004s2654 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13417895-13418894 Capsella rubella
Carub.0004s2654 2.0kb upstream 2.0kb upstream 5259 true scaffold_4: 13418895-13424153 Capsella rubella
Carub.0004s2654 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13422154-13424153 Capsella rubella
Carub.0004s2654 2.0kb downstream 2.0kb downstream 5259 true scaffold_4: 13416895-13422153 Capsella rubella
Carub.0004s2654 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13416895-13418894 Capsella rubella
Carub.0004s2654 5.0kb upstream 5.0kb upstream 8259 true scaffold_4: 13418895-13427153 Capsella rubella
Carub.0004s2654 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13422154-13427153 Capsella rubella
Carub.0004s2654 5.0kb downstream 5.0kb downstream 8259 true scaffold_4: 13413895-13422153 Capsella rubella
Carub.0004s2654 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13413895-13418894 Capsella rubella
Carub.0004s2654 10.0kb upstream 10.0kb upstream 13259 true scaffold_4: 13418895-13432153 Capsella rubella
Carub.0004s2654 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13422154-13432153 Capsella rubella
Carub.0004s2654 10.0kb downstream 10.0kb downstream 13259 true scaffold_4: 13408895-13422153 Capsella rubella
Carub.0004s2654 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13408895-13418894 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369178 5261 Brassicaceae View MSA
123831358 5264 Brassicales-Malvales View MSA
124343367 5266 SBM View MSA
124239106 5268 Malvidae View MSA
124062459 5270 Rosid View MSA
123738730 5271 Pentapetalae View MSA
122785749 5272 Eudicot View MSA
122045503 5273 Angiosperm View MSA
121345915 5274 Embryophyte View MSA
123428316 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain