Gene : Carub.0004s2676 C. rubella v1.1
Defline:  (1 of 2) PTHR31807:SF6 - PROTEIN ENDOSPERM DEFECTIVE 1-RELATED Genomic Order:  2676
Name:  ? Carub.0004s2676 Secondary Identifier:  ? PAC:39236458
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2676 0.5kb upstream 0.5kb upstream 2827 true scaffold_4: 13484301-13487127 Capsella rubella
Carub.0004s2676 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13484301-13484800 Capsella rubella
Carub.0004s2676 0.5kb downstream 0.5kb downstream 2827 true scaffold_4: 13484801-13487627 Capsella rubella
Carub.0004s2676 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13487128-13487627 Capsella rubella
Carub.0004s2676 1.0kb upstream 1.0kb upstream 3327 true scaffold_4: 13483801-13487127 Capsella rubella
Carub.0004s2676 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13483801-13484800 Capsella rubella
Carub.0004s2676 1.0kb downstream 1.0kb downstream 3327 true scaffold_4: 13484801-13488127 Capsella rubella
Carub.0004s2676 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13487128-13488127 Capsella rubella
Carub.0004s2676 2.0kb upstream 2.0kb upstream 4327 true scaffold_4: 13482801-13487127 Capsella rubella
Carub.0004s2676 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13482801-13484800 Capsella rubella
Carub.0004s2676 2.0kb downstream 2.0kb downstream 4327 true scaffold_4: 13484801-13489127 Capsella rubella
Carub.0004s2676 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13487128-13489127 Capsella rubella
Carub.0004s2676 5.0kb upstream 5.0kb upstream 7327 true scaffold_4: 13479801-13487127 Capsella rubella
Carub.0004s2676 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13479801-13484800 Capsella rubella
Carub.0004s2676 5.0kb downstream 5.0kb downstream 7327 true scaffold_4: 13484801-13492127 Capsella rubella
Carub.0004s2676 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13487128-13492127 Capsella rubella
Carub.0004s2676 10.0kb upstream 10.0kb upstream 12327 true scaffold_4: 13474801-13487127 Capsella rubella
Carub.0004s2676 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13474801-13484800 Capsella rubella
Carub.0004s2676 10.0kb downstream 10.0kb downstream 12327 true scaffold_4: 13484801-13497127 Capsella rubella
Carub.0004s2676 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13487128-13497127 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363426 5261 Brassicaceae View MSA
123828950 5264 Brassicales-Malvales View MSA
124346593 5266 SBM View MSA
124248083 5268 Malvidae View MSA
124067070 5270 Rosid View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain