Gene : Carub.0004s2982 C. rubella v1.1
Defline:  (1 of 2) PTHR11964:SF16 - S-ADENOSYLMETHIONINE SYNTHASE 4 Genomic Order:  2982
Name:  ? Carub.0004s2982 Secondary Identifier:  ? PAC:39237333
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ETHYL-PWY Capsella rubella pathologic  
Crubella PWY-5041 Capsella rubella pathologic  
Crubella PWY-7270 Capsella rubella pathologic  
Crubella PWY-7528 Capsella rubella pathologic  
Crubella SAM-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2982 0.5kb upstream 0.5kb upstream 2320 true scaffold_4: 14661115-14663434 Capsella rubella
Carub.0004s2982 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 14662935-14663434 Capsella rubella
Carub.0004s2982 0.5kb downstream 0.5kb downstream 2320 true scaffold_4: 14660615-14662934 Capsella rubella
Carub.0004s2982 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 14660615-14661114 Capsella rubella
Carub.0004s2982 1.0kb upstream 1.0kb upstream 2820 true scaffold_4: 14661115-14663934 Capsella rubella
Carub.0004s2982 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 14662935-14663934 Capsella rubella
Carub.0004s2982 1.0kb downstream 1.0kb downstream 2820 true scaffold_4: 14660115-14662934 Capsella rubella
Carub.0004s2982 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 14660115-14661114 Capsella rubella
Carub.0004s2982 2.0kb upstream 2.0kb upstream 3820 true scaffold_4: 14661115-14664934 Capsella rubella
Carub.0004s2982 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 14662935-14664934 Capsella rubella
Carub.0004s2982 2.0kb downstream 2.0kb downstream 3820 true scaffold_4: 14659115-14662934 Capsella rubella
Carub.0004s2982 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 14659115-14661114 Capsella rubella
Carub.0004s2982 5.0kb upstream 5.0kb upstream 6820 true scaffold_4: 14661115-14667934 Capsella rubella
Carub.0004s2982 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 14662935-14667934 Capsella rubella
Carub.0004s2982 5.0kb downstream 5.0kb downstream 6820 true scaffold_4: 14656115-14662934 Capsella rubella
Carub.0004s2982 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 14656115-14661114 Capsella rubella
Carub.0004s2982 10.0kb upstream 10.0kb upstream 11820 true scaffold_4: 14661115-14672934 Capsella rubella
Carub.0004s2982 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 14662935-14672934 Capsella rubella
Carub.0004s2982 10.0kb downstream 10.0kb downstream 11820 true scaffold_4: 14651115-14662934 Capsella rubella
Carub.0004s2982 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 14651115-14661114 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380556 5261 Brassicaceae View MSA
123802782 5264 Brassicales-Malvales View MSA
124299948 5266 SBM View MSA
124151241 5268 Malvidae View MSA
124071804 5270 Rosid View MSA
123752865 5271 Pentapetalae View MSA
122794208 5272 Eudicot View MSA
122047125 5273 Angiosperm View MSA
121349455 5274 Embryophyte View MSA
123428115 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain