Gene : Carub.0004s3000 C. rubella v1.1

Defline:  (1 of 1) PTHR31221//PTHR31221:SF23 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 23-RELATED Genomic Order:  3000
Name:  ? Carub.0004s3000 Secondary Identifier:  ? PAC:39237618

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s3000 0.5kb upstream 0.5kb upstream 2411 true scaffold_4: 14745180-14747590 Capsella rubella
Carub.0004s3000 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 14747091-14747590 Capsella rubella
Carub.0004s3000 0.5kb downstream 0.5kb downstream 2411 true scaffold_4: 14744680-14747090 Capsella rubella
Carub.0004s3000 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 14744680-14745179 Capsella rubella
Carub.0004s3000 1.0kb upstream 1.0kb upstream 2911 true scaffold_4: 14745180-14748090 Capsella rubella
Carub.0004s3000 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 14747091-14748090 Capsella rubella
Carub.0004s3000 1.0kb downstream 1.0kb downstream 2911 true scaffold_4: 14744180-14747090 Capsella rubella
Carub.0004s3000 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 14744180-14745179 Capsella rubella
Carub.0004s3000 2.0kb upstream 2.0kb upstream 3911 true scaffold_4: 14745180-14749090 Capsella rubella
Carub.0004s3000 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 14747091-14749090 Capsella rubella
Carub.0004s3000 2.0kb downstream 2.0kb downstream 3911 true scaffold_4: 14743180-14747090 Capsella rubella
Carub.0004s3000 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 14743180-14745179 Capsella rubella
Carub.0004s3000 5.0kb upstream 5.0kb upstream 6911 true scaffold_4: 14745180-14752090 Capsella rubella
Carub.0004s3000 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 14747091-14752090 Capsella rubella
Carub.0004s3000 5.0kb downstream 5.0kb downstream 6911 true scaffold_4: 14740180-14747090 Capsella rubella
Carub.0004s3000 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 14740180-14745179 Capsella rubella
Carub.0004s3000 10.0kb upstream 10.0kb upstream 11911 true scaffold_4: 14745180-14757090 Capsella rubella
Carub.0004s3000 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 14747091-14757090 Capsella rubella
Carub.0004s3000 10.0kb downstream 10.0kb downstream 11911 true scaffold_4: 14735180-14747090 Capsella rubella
Carub.0004s3000 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 14735180-14745179 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379946 5261 Brassicaceae View MSA
123840641 5264 Brassicales-Malvales View MSA
124344707 5266 SBM View MSA
124240513 5268 Malvidae View MSA
124074051 5270 Rosid View MSA
123746347 5271 Pentapetalae View MSA
122795179 5272 Eudicot View MSA
122045566 5273 Angiosperm View MSA
121351214 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain