Gene : Carub.0004s3059 C. rubella v1.1
Defline:  (1 of 4) PTHR10168//PTHR10168:SF57 - GLUTAREDOXIN // GLUTAREDOXIN-C13-RELATED Genomic Order:  3059
Name:  ? Carub.0004s3059 Secondary Identifier:  ? PAC:39238407
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella THIOREDOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s3059 0.5kb upstream 0.5kb upstream 809 true scaffold_4: 14944387-14945195 Capsella rubella
Carub.0004s3059 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 14944387-14944886 Capsella rubella
Carub.0004s3059 0.5kb downstream 0.5kb downstream 809 true scaffold_4: 14944887-14945695 Capsella rubella
Carub.0004s3059 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 14945196-14945695 Capsella rubella
Carub.0004s3059 1.0kb upstream 1.0kb upstream 1309 true scaffold_4: 14943887-14945195 Capsella rubella
Carub.0004s3059 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 14943887-14944886 Capsella rubella
Carub.0004s3059 1.0kb downstream 1.0kb downstream 1309 true scaffold_4: 14944887-14946195 Capsella rubella
Carub.0004s3059 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 14945196-14946195 Capsella rubella
Carub.0004s3059 2.0kb upstream 2.0kb upstream 2309 true scaffold_4: 14942887-14945195 Capsella rubella
Carub.0004s3059 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 14942887-14944886 Capsella rubella
Carub.0004s3059 2.0kb downstream 2.0kb downstream 2309 true scaffold_4: 14944887-14947195 Capsella rubella
Carub.0004s3059 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 14945196-14947195 Capsella rubella
Carub.0004s3059 5.0kb upstream 5.0kb upstream 5309 true scaffold_4: 14939887-14945195 Capsella rubella
Carub.0004s3059 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 14939887-14944886 Capsella rubella
Carub.0004s3059 5.0kb downstream 5.0kb downstream 5309 true scaffold_4: 14944887-14950195 Capsella rubella
Carub.0004s3059 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 14945196-14950195 Capsella rubella
Carub.0004s3059 10.0kb upstream 10.0kb upstream 10309 true scaffold_4: 14934887-14945195 Capsella rubella
Carub.0004s3059 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 14934887-14944886 Capsella rubella
Carub.0004s3059 10.0kb downstream 10.0kb downstream 10309 true scaffold_4: 14944887-14955195 Capsella rubella
Carub.0004s3059 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 14945196-14955195 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028026 5273 Angiosperm View MSA
122372201 5261 Brassicaceae View MSA
123839290 5264 Brassicales-Malvales View MSA
124342010 5266 SBM View MSA
124253588 5268 Malvidae View MSA
124060957 5270 Rosid View MSA
123747538 5271 Pentapetalae View MSA
122788985 5272 Eudicot View MSA
121297578 5274 Embryophyte View MSA
123335620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain