Gene : Carub.0004s3084 C. rubella v1.1
Defline:  (1 of 2) PTHR12550:SF5 - HUA2-LIKE PROTEIN 2-RELATED Genomic Order:  3084
Name:  ? Carub.0004s3084 Secondary Identifier:  ? PAC:39238396
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s3084 0.5kb upstream 0.5kb upstream 8074 true scaffold_4: 15029260-15037333 Capsella rubella
Carub.0004s3084 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 15029260-15029759 Capsella rubella
Carub.0004s3084 0.5kb downstream 0.5kb downstream 8074 true scaffold_4: 15029760-15037833 Capsella rubella
Carub.0004s3084 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 15037334-15037833 Capsella rubella
Carub.0004s3084 1.0kb upstream 1.0kb upstream 8574 true scaffold_4: 15028760-15037333 Capsella rubella
Carub.0004s3084 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 15028760-15029759 Capsella rubella
Carub.0004s3084 1.0kb downstream 1.0kb downstream 8574 true scaffold_4: 15029760-15038333 Capsella rubella
Carub.0004s3084 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 15037334-15038333 Capsella rubella
Carub.0004s3084 2.0kb upstream 2.0kb upstream 9574 true scaffold_4: 15027760-15037333 Capsella rubella
Carub.0004s3084 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 15027760-15029759 Capsella rubella
Carub.0004s3084 2.0kb downstream 2.0kb downstream 9574 true scaffold_4: 15029760-15039333 Capsella rubella
Carub.0004s3084 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 15037334-15039333 Capsella rubella
Carub.0004s3084 5.0kb upstream 5.0kb upstream 12574 true scaffold_4: 15024760-15037333 Capsella rubella
Carub.0004s3084 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 15024760-15029759 Capsella rubella
Carub.0004s3084 5.0kb downstream 5.0kb downstream 12574 true scaffold_4: 15029760-15042333 Capsella rubella
Carub.0004s3084 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 15037334-15042333 Capsella rubella
Carub.0004s3084 10.0kb upstream 10.0kb upstream 17574 true scaffold_4: 15019760-15037333 Capsella rubella
Carub.0004s3084 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 15019760-15029759 Capsella rubella
Carub.0004s3084 10.0kb downstream 10.0kb downstream 16004 true scaffold_4: 15029760-15045763 Capsella rubella
Carub.0004s3084 10.0kb downstream 10.0kb downstream 8430 false scaffold_4: 15037334-15045763 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377448 5261 Brassicaceae View MSA
123839388 5264 Brassicales-Malvales View MSA
124337608 5266 SBM View MSA
124240604 5268 Malvidae View MSA
124068925 5270 Rosid View MSA
123739923 5271 Pentapetalae View MSA
122787365 5272 Eudicot View MSA
122045981 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain