Gene : Carub.0004s2871 C. rubella v1.1
Defline:  (1 of 1) PTHR10799//PTHR10799:SF577 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // PROTEIN TAF-3, ISOFORM A Genomic Order:  2871
Name:  ? Carub.0004s2871 Secondary Identifier:  ? PAC:39237405
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2871 0.5kb upstream 0.5kb upstream 9681 true scaffold_4: 14211973-14221653 Capsella rubella
Carub.0004s2871 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 14211973-14212472 Capsella rubella
Carub.0004s2871 0.5kb downstream 0.5kb downstream 9681 true scaffold_4: 14212473-14222153 Capsella rubella
Carub.0004s2871 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 14221654-14222153 Capsella rubella
Carub.0004s2871 1.0kb upstream 1.0kb upstream 10181 true scaffold_4: 14211473-14221653 Capsella rubella
Carub.0004s2871 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 14211473-14212472 Capsella rubella
Carub.0004s2871 1.0kb downstream 1.0kb downstream 10181 true scaffold_4: 14212473-14222653 Capsella rubella
Carub.0004s2871 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 14221654-14222653 Capsella rubella
Carub.0004s2871 2.0kb upstream 2.0kb upstream 11181 true scaffold_4: 14210473-14221653 Capsella rubella
Carub.0004s2871 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 14210473-14212472 Capsella rubella
Carub.0004s2871 2.0kb downstream 2.0kb downstream 11181 true scaffold_4: 14212473-14223653 Capsella rubella
Carub.0004s2871 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 14221654-14223653 Capsella rubella
Carub.0004s2871 5.0kb upstream 5.0kb upstream 14181 true scaffold_4: 14207473-14221653 Capsella rubella
Carub.0004s2871 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 14207473-14212472 Capsella rubella
Carub.0004s2871 5.0kb downstream 5.0kb downstream 14181 true scaffold_4: 14212473-14226653 Capsella rubella
Carub.0004s2871 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 14221654-14226653 Capsella rubella
Carub.0004s2871 10.0kb upstream 10.0kb upstream 19181 true scaffold_4: 14202473-14221653 Capsella rubella
Carub.0004s2871 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 14202473-14212472 Capsella rubella
Carub.0004s2871 10.0kb downstream 10.0kb downstream 19181 true scaffold_4: 14212473-14231653 Capsella rubella
Carub.0004s2871 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 14221654-14231653 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377449 5261 Brassicaceae View MSA
123839207 5264 Brassicales-Malvales View MSA
124350968 5266 SBM View MSA
124246961 5268 Malvidae View MSA
124061210 5270 Rosid View MSA
123746200 5271 Pentapetalae View MSA
122788143 5272 Eudicot View MSA
122044493 5273 Angiosperm View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain