Gene : Carub.0004s2963 C. rubella v1.1

Defline:  (1 of 14) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  2963
Name:  ? Carub.0004s2963 Secondary Identifier:  ? PAC:39238743

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2963 0.5kb upstream 0.5kb upstream 2494 true scaffold_4: 14587218-14589711 Capsella rubella
Carub.0004s2963 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 14587218-14587717 Capsella rubella
Carub.0004s2963 0.5kb downstream 0.5kb downstream 2494 true scaffold_4: 14587718-14590211 Capsella rubella
Carub.0004s2963 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 14589712-14590211 Capsella rubella
Carub.0004s2963 1.0kb upstream 1.0kb upstream 2994 true scaffold_4: 14586718-14589711 Capsella rubella
Carub.0004s2963 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 14586718-14587717 Capsella rubella
Carub.0004s2963 1.0kb downstream 1.0kb downstream 2994 true scaffold_4: 14587718-14590711 Capsella rubella
Carub.0004s2963 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 14589712-14590711 Capsella rubella
Carub.0004s2963 2.0kb upstream 2.0kb upstream 3994 true scaffold_4: 14585718-14589711 Capsella rubella
Carub.0004s2963 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 14585718-14587717 Capsella rubella
Carub.0004s2963 2.0kb downstream 2.0kb downstream 3994 true scaffold_4: 14587718-14591711 Capsella rubella
Carub.0004s2963 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 14589712-14591711 Capsella rubella
Carub.0004s2963 5.0kb upstream 5.0kb upstream 6994 true scaffold_4: 14582718-14589711 Capsella rubella
Carub.0004s2963 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 14582718-14587717 Capsella rubella
Carub.0004s2963 5.0kb downstream 5.0kb downstream 6994 true scaffold_4: 14587718-14594711 Capsella rubella
Carub.0004s2963 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 14589712-14594711 Capsella rubella
Carub.0004s2963 10.0kb upstream 10.0kb upstream 11994 true scaffold_4: 14577718-14589711 Capsella rubella
Carub.0004s2963 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 14577718-14587717 Capsella rubella
Carub.0004s2963 10.0kb downstream 10.0kb downstream 11994 true scaffold_4: 14587718-14599711 Capsella rubella
Carub.0004s2963 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 14589712-14599711 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378863 5261 Brassicaceae View MSA
123837011 5264 Brassicales-Malvales View MSA
124346972 5266 SBM View MSA
124245725 5268 Malvidae View MSA
124069278 5270 Rosid View MSA
123746031 5271 Pentapetalae View MSA
122794161 5272 Eudicot View MSA
122048441 5273 Angiosperm View MSA
121348258 5274 Embryophyte View MSA
123425771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain