Gene : Carub.0004s2959 C. rubella v1.1
Defline:  (1 of 4) PTHR31140//PTHR31140:SF4 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA1-RELATED Genomic Order:  2959
Name:  ? Carub.0004s2959 Secondary Identifier:  ? PAC:39238269
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2959 0.5kb upstream 0.5kb upstream 1828 true scaffold_4: 14576598-14578425 Capsella rubella
Carub.0004s2959 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 14576598-14577097 Capsella rubella
Carub.0004s2959 0.5kb downstream 0.5kb downstream 1828 true scaffold_4: 14577098-14578925 Capsella rubella
Carub.0004s2959 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 14578426-14578925 Capsella rubella
Carub.0004s2959 1.0kb upstream 1.0kb upstream 2328 true scaffold_4: 14576098-14578425 Capsella rubella
Carub.0004s2959 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 14576098-14577097 Capsella rubella
Carub.0004s2959 1.0kb downstream 1.0kb downstream 2328 true scaffold_4: 14577098-14579425 Capsella rubella
Carub.0004s2959 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 14578426-14579425 Capsella rubella
Carub.0004s2959 2.0kb upstream 2.0kb upstream 3328 true scaffold_4: 14575098-14578425 Capsella rubella
Carub.0004s2959 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 14575098-14577097 Capsella rubella
Carub.0004s2959 2.0kb downstream 2.0kb downstream 3328 true scaffold_4: 14577098-14580425 Capsella rubella
Carub.0004s2959 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 14578426-14580425 Capsella rubella
Carub.0004s2959 5.0kb upstream 5.0kb upstream 6328 true scaffold_4: 14572098-14578425 Capsella rubella
Carub.0004s2959 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 14572098-14577097 Capsella rubella
Carub.0004s2959 5.0kb downstream 5.0kb downstream 6328 true scaffold_4: 14577098-14583425 Capsella rubella
Carub.0004s2959 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 14578426-14583425 Capsella rubella
Carub.0004s2959 10.0kb upstream 10.0kb upstream 11328 true scaffold_4: 14567098-14578425 Capsella rubella
Carub.0004s2959 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 14567098-14577097 Capsella rubella
Carub.0004s2959 10.0kb downstream 10.0kb downstream 11328 true scaffold_4: 14577098-14588425 Capsella rubella
Carub.0004s2959 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 14578426-14588425 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373082 5261 Brassicaceae View MSA
123837410 5264 Brassicales-Malvales View MSA
124350382 5266 SBM View MSA
124246333 5268 Malvidae View MSA
124069436 5270 Rosid View MSA
123743929 5271 Pentapetalae View MSA
122797539 5272 Eudicot View MSA
122049835 5273 Angiosperm View MSA
121349423 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain