Gene : Carub.0005s0183 C. rubella v1.1
Defline:  (1 of 1) PTHR31576:SF2 - TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B Genomic Order:  183
Name:  ? Carub.0005s0183 Secondary Identifier:  ? PAC:39225025
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0183 0.5kb upstream 0.5kb upstream 2992 true scaffold_5: 722693-725684 Capsella rubella
Carub.0005s0183 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 722693-723192 Capsella rubella
Carub.0005s0183 0.5kb downstream 0.5kb downstream 2992 true scaffold_5: 723193-726184 Capsella rubella
Carub.0005s0183 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 725685-726184 Capsella rubella
Carub.0005s0183 1.0kb upstream 1.0kb upstream 3492 true scaffold_5: 722193-725684 Capsella rubella
Carub.0005s0183 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 722193-723192 Capsella rubella
Carub.0005s0183 1.0kb downstream 1.0kb downstream 3492 true scaffold_5: 723193-726684 Capsella rubella
Carub.0005s0183 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 725685-726684 Capsella rubella
Carub.0005s0183 2.0kb upstream 2.0kb upstream 4492 true scaffold_5: 721193-725684 Capsella rubella
Carub.0005s0183 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 721193-723192 Capsella rubella
Carub.0005s0183 2.0kb downstream 2.0kb downstream 4492 true scaffold_5: 723193-727684 Capsella rubella
Carub.0005s0183 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 725685-727684 Capsella rubella
Carub.0005s0183 5.0kb upstream 5.0kb upstream 7492 true scaffold_5: 718193-725684 Capsella rubella
Carub.0005s0183 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 718193-723192 Capsella rubella
Carub.0005s0183 5.0kb downstream 5.0kb downstream 7492 true scaffold_5: 723193-730684 Capsella rubella
Carub.0005s0183 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 725685-730684 Capsella rubella
Carub.0005s0183 10.0kb upstream 10.0kb upstream 12492 true scaffold_5: 713193-725684 Capsella rubella
Carub.0005s0183 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 713193-723192 Capsella rubella
Carub.0005s0183 10.0kb downstream 10.0kb downstream 12492 true scaffold_5: 723193-735684 Capsella rubella
Carub.0005s0183 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 725685-735684 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369855 5261 Brassicaceae View MSA
123829708 5264 Brassicales-Malvales View MSA
124338977 5266 SBM View MSA
124244133 5268 Malvidae View MSA
124065937 5270 Rosid View MSA
123742102 5271 Pentapetalae View MSA
122796533 5272 Eudicot View MSA
122050673 5273 Angiosperm View MSA
121345414 5274 Embryophyte View MSA
123427215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain