Gene : Carub.0005s0278 C. rubella v1.1
Defline:  (1 of 2) PTHR10693//PTHR10693:SF27 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN Genomic Order:  278
Name:  ? Carub.0005s0278 Secondary Identifier:  ? PAC:39225927
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0278 0.5kb upstream 0.5kb upstream 3287 true scaffold_5: 1115439-1118725 Capsella rubella
Carub.0005s0278 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1118226-1118725 Capsella rubella
Carub.0005s0278 0.5kb downstream 0.5kb downstream 3287 true scaffold_5: 1114939-1118225 Capsella rubella
Carub.0005s0278 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1114939-1115438 Capsella rubella
Carub.0005s0278 1.0kb upstream 1.0kb upstream 3787 true scaffold_5: 1115439-1119225 Capsella rubella
Carub.0005s0278 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1118226-1119225 Capsella rubella
Carub.0005s0278 1.0kb downstream 1.0kb downstream 3787 true scaffold_5: 1114439-1118225 Capsella rubella
Carub.0005s0278 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1114439-1115438 Capsella rubella
Carub.0005s0278 2.0kb upstream 2.0kb upstream 4787 true scaffold_5: 1115439-1120225 Capsella rubella
Carub.0005s0278 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1118226-1120225 Capsella rubella
Carub.0005s0278 2.0kb downstream 2.0kb downstream 4787 true scaffold_5: 1113439-1118225 Capsella rubella
Carub.0005s0278 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1113439-1115438 Capsella rubella
Carub.0005s0278 5.0kb upstream 5.0kb upstream 7787 true scaffold_5: 1115439-1123225 Capsella rubella
Carub.0005s0278 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1118226-1123225 Capsella rubella
Carub.0005s0278 5.0kb downstream 5.0kb downstream 7787 true scaffold_5: 1110439-1118225 Capsella rubella
Carub.0005s0278 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1110439-1115438 Capsella rubella
Carub.0005s0278 10.0kb upstream 10.0kb upstream 12787 true scaffold_5: 1115439-1128225 Capsella rubella
Carub.0005s0278 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1118226-1128225 Capsella rubella
Carub.0005s0278 10.0kb downstream 10.0kb downstream 12787 true scaffold_5: 1105439-1118225 Capsella rubella
Carub.0005s0278 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1105439-1115438 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373322 5261 Brassicaceae View MSA
123839234 5264 Brassicales-Malvales View MSA
124322585 5266 SBM View MSA
124253817 5268 Malvidae View MSA
124070986 5270 Rosid View MSA
123751309 5271 Pentapetalae View MSA
122795066 5272 Eudicot View MSA
122049730 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain