Gene : Carub.0005s0007 C. rubella v1.1
Defline:  (1 of 1) PTHR31234//PTHR31234:SF8 - FAMILY NOT NAMED // EXPRESSED PROTEIN Genomic Order:  7
Name:  ? Carub.0005s0007 Secondary Identifier:  ? PAC:39223963
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0007 0.5kb upstream 0.5kb upstream 2120 true scaffold_5: 21976-24095 Capsella rubella
Carub.0005s0007 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 21976-22475 Capsella rubella
Carub.0005s0007 0.5kb downstream 0.5kb downstream 2120 true scaffold_5: 22476-24595 Capsella rubella
Carub.0005s0007 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 24096-24595 Capsella rubella
Carub.0005s0007 1.0kb upstream 1.0kb upstream 2620 true scaffold_5: 21476-24095 Capsella rubella
Carub.0005s0007 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 21476-22475 Capsella rubella
Carub.0005s0007 1.0kb downstream 1.0kb downstream 2620 true scaffold_5: 22476-25095 Capsella rubella
Carub.0005s0007 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 24096-25095 Capsella rubella
Carub.0005s0007 2.0kb upstream 2.0kb upstream 3620 true scaffold_5: 20476-24095 Capsella rubella
Carub.0005s0007 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 20476-22475 Capsella rubella
Carub.0005s0007 2.0kb downstream 2.0kb downstream 3620 true scaffold_5: 22476-26095 Capsella rubella
Carub.0005s0007 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 24096-26095 Capsella rubella
Carub.0005s0007 5.0kb upstream 5.0kb upstream 6620 true scaffold_5: 17476-24095 Capsella rubella
Carub.0005s0007 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 17476-22475 Capsella rubella
Carub.0005s0007 5.0kb downstream 5.0kb downstream 6620 true scaffold_5: 22476-29095 Capsella rubella
Carub.0005s0007 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 24096-29095 Capsella rubella
Carub.0005s0007 10.0kb upstream 10.0kb upstream 11620 true scaffold_5: 12476-24095 Capsella rubella
Carub.0005s0007 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 12476-22475 Capsella rubella
Carub.0005s0007 10.0kb downstream 10.0kb downstream 11620 true scaffold_5: 22476-34095 Capsella rubella
Carub.0005s0007 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 24096-34095 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375025 5261 Brassicaceae View MSA
123833039 5264 Brassicales-Malvales View MSA
124342716 5266 SBM View MSA
124243213 5268 Malvidae View MSA
124067884 5270 Rosid View MSA
123745093 5271 Pentapetalae View MSA
122786322 5272 Eudicot View MSA
122042792 5273 Angiosperm View MSA
121350996 5274 Embryophyte View MSA
123381963 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain