Gene : Carub.0005s0017 C. rubella v1.1
Defline:  (1 of 2) PTHR31066//PTHR31066:SF12 - FAMILY NOT NAMED // EXPRESSED PROTEIN Genomic Order:  17
Name:  ? Carub.0005s0017 Secondary Identifier:  ? PAC:39226713
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0017 0.5kb upstream 0.5kb upstream 3380 true scaffold_5: 62145-65524 Capsella rubella
Carub.0005s0017 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 62145-62644 Capsella rubella
Carub.0005s0017 0.5kb downstream 0.5kb downstream 3380 true scaffold_5: 62645-66024 Capsella rubella
Carub.0005s0017 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 65525-66024 Capsella rubella
Carub.0005s0017 1.0kb upstream 1.0kb upstream 3880 true scaffold_5: 61645-65524 Capsella rubella
Carub.0005s0017 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 61645-62644 Capsella rubella
Carub.0005s0017 1.0kb downstream 1.0kb downstream 3880 true scaffold_5: 62645-66524 Capsella rubella
Carub.0005s0017 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 65525-66524 Capsella rubella
Carub.0005s0017 2.0kb upstream 2.0kb upstream 4880 true scaffold_5: 60645-65524 Capsella rubella
Carub.0005s0017 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 60645-62644 Capsella rubella
Carub.0005s0017 2.0kb downstream 2.0kb downstream 4880 true scaffold_5: 62645-67524 Capsella rubella
Carub.0005s0017 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 65525-67524 Capsella rubella
Carub.0005s0017 5.0kb upstream 5.0kb upstream 7880 true scaffold_5: 57645-65524 Capsella rubella
Carub.0005s0017 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 57645-62644 Capsella rubella
Carub.0005s0017 5.0kb downstream 5.0kb downstream 7880 true scaffold_5: 62645-70524 Capsella rubella
Carub.0005s0017 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 65525-70524 Capsella rubella
Carub.0005s0017 10.0kb upstream 10.0kb upstream 12880 true scaffold_5: 52645-65524 Capsella rubella
Carub.0005s0017 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 52645-62644 Capsella rubella
Carub.0005s0017 10.0kb downstream 10.0kb downstream 12880 true scaffold_5: 62645-75524 Capsella rubella
Carub.0005s0017 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 65525-75524 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372294 5261 Brassicaceae View MSA
123830196 5264 Brassicales-Malvales View MSA
124345523 5266 SBM View MSA
124241143 5268 Malvidae View MSA
124062751 5270 Rosid View MSA
123746774 5271 Pentapetalae View MSA
122786631 5272 Eudicot View MSA
122047494 5273 Angiosperm View MSA
121310747 5274 Embryophyte View MSA
123348158 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain