Gene : Carub.0005s0100 C. rubella v1.1
Genomic Order:  100 Name:  ? Carub.0005s0100
Secondary Identifier:  ? PAC:39226283
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0100 0.5kb upstream 0.5kb upstream 2229 true scaffold_5: 408923-411151 Capsella rubella
Carub.0005s0100 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 410652-411151 Capsella rubella
Carub.0005s0100 0.5kb downstream 0.5kb downstream 2229 true scaffold_5: 408423-410651 Capsella rubella
Carub.0005s0100 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 408423-408922 Capsella rubella
Carub.0005s0100 1.0kb upstream 1.0kb upstream 2729 true scaffold_5: 408923-411651 Capsella rubella
Carub.0005s0100 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 410652-411651 Capsella rubella
Carub.0005s0100 1.0kb downstream 1.0kb downstream 2729 true scaffold_5: 407923-410651 Capsella rubella
Carub.0005s0100 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 407923-408922 Capsella rubella
Carub.0005s0100 2.0kb upstream 2.0kb upstream 3729 true scaffold_5: 408923-412651 Capsella rubella
Carub.0005s0100 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 410652-412651 Capsella rubella
Carub.0005s0100 2.0kb downstream 2.0kb downstream 3729 true scaffold_5: 406923-410651 Capsella rubella
Carub.0005s0100 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 406923-408922 Capsella rubella
Carub.0005s0100 5.0kb upstream 5.0kb upstream 6729 true scaffold_5: 408923-415651 Capsella rubella
Carub.0005s0100 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 410652-415651 Capsella rubella
Carub.0005s0100 5.0kb downstream 5.0kb downstream 6729 true scaffold_5: 403923-410651 Capsella rubella
Carub.0005s0100 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 403923-408922 Capsella rubella
Carub.0005s0100 10.0kb upstream 10.0kb upstream 11729 true scaffold_5: 408923-420651 Capsella rubella
Carub.0005s0100 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 410652-420651 Capsella rubella
Carub.0005s0100 10.0kb downstream 10.0kb downstream 11729 true scaffold_5: 398923-410651 Capsella rubella
Carub.0005s0100 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 398923-408922 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363252 5261 Brassicaceae View MSA
123829558 5264 Brassicales-Malvales View MSA
124340290 5266 SBM View MSA
124242449 5268 Malvidae View MSA
124069891 5270 Rosid View MSA
123747205 5271 Pentapetalae View MSA
122796968 5272 Eudicot View MSA
122050817 5273 Angiosperm View MSA
121348278 5274 Embryophyte View MSA
123380804 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain