Gene : Carub.0005s0098 C. rubella v1.1
Defline:  (1 of 3) PTHR10766//PTHR10766:SF58 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  98
Name:  ? Carub.0005s0098 Secondary Identifier:  ? PAC:39223705
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0098 0.5kb upstream 0.5kb upstream 3679 true scaffold_5: 394149-397827 Capsella rubella
Carub.0005s0098 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 397328-397827 Capsella rubella
Carub.0005s0098 0.5kb downstream 0.5kb downstream 3679 true scaffold_5: 393649-397327 Capsella rubella
Carub.0005s0098 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 393649-394148 Capsella rubella
Carub.0005s0098 1.0kb upstream 1.0kb upstream 4179 true scaffold_5: 394149-398327 Capsella rubella
Carub.0005s0098 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 397328-398327 Capsella rubella
Carub.0005s0098 1.0kb downstream 1.0kb downstream 4179 true scaffold_5: 393149-397327 Capsella rubella
Carub.0005s0098 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 393149-394148 Capsella rubella
Carub.0005s0098 2.0kb upstream 2.0kb upstream 5179 true scaffold_5: 394149-399327 Capsella rubella
Carub.0005s0098 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 397328-399327 Capsella rubella
Carub.0005s0098 2.0kb downstream 2.0kb downstream 5179 true scaffold_5: 392149-397327 Capsella rubella
Carub.0005s0098 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 392149-394148 Capsella rubella
Carub.0005s0098 5.0kb upstream 5.0kb upstream 8179 true scaffold_5: 394149-402327 Capsella rubella
Carub.0005s0098 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 397328-402327 Capsella rubella
Carub.0005s0098 5.0kb downstream 5.0kb downstream 8179 true scaffold_5: 389149-397327 Capsella rubella
Carub.0005s0098 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 389149-394148 Capsella rubella
Carub.0005s0098 10.0kb upstream 10.0kb upstream 13179 true scaffold_5: 394149-407327 Capsella rubella
Carub.0005s0098 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 397328-407327 Capsella rubella
Carub.0005s0098 10.0kb downstream 10.0kb downstream 13179 true scaffold_5: 384149-397327 Capsella rubella
Carub.0005s0098 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 384149-394148 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373849 5261 Brassicaceae View MSA
123837082 5264 Brassicales-Malvales View MSA
124344667 5266 SBM View MSA
124253929 5268 Malvidae View MSA
124069153 5270 Rosid View MSA
123738097 5271 Pentapetalae View MSA
122788164 5272 Eudicot View MSA
122049966 5273 Angiosperm View MSA
121347784 5274 Embryophyte View MSA
123425763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain