Gene : Carub.0005s0437 C. rubella v1.1

Defline:  (1 of 2) PTHR32091//PTHR32091:SF0 - FAMILY NOT NAMED // EUKARYOTIC INITIATION FACTOR 4B-RELATED Genomic Order:  437
Name:  ? Carub.0005s0437 Secondary Identifier:  ? PAC:39226718

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0437 0.5kb upstream 0.5kb upstream 3294 true scaffold_5: 1747258-1750551 Capsella rubella
Carub.0005s0437 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1747258-1747757 Capsella rubella
Carub.0005s0437 0.5kb downstream 0.5kb downstream 3294 true scaffold_5: 1747758-1751051 Capsella rubella
Carub.0005s0437 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1750552-1751051 Capsella rubella
Carub.0005s0437 1.0kb upstream 1.0kb upstream 3794 true scaffold_5: 1746758-1750551 Capsella rubella
Carub.0005s0437 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1746758-1747757 Capsella rubella
Carub.0005s0437 1.0kb downstream 1.0kb downstream 3794 true scaffold_5: 1747758-1751551 Capsella rubella
Carub.0005s0437 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1750552-1751551 Capsella rubella
Carub.0005s0437 2.0kb upstream 2.0kb upstream 4794 true scaffold_5: 1745758-1750551 Capsella rubella
Carub.0005s0437 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1745758-1747757 Capsella rubella
Carub.0005s0437 2.0kb downstream 2.0kb downstream 4794 true scaffold_5: 1747758-1752551 Capsella rubella
Carub.0005s0437 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1750552-1752551 Capsella rubella
Carub.0005s0437 5.0kb upstream 5.0kb upstream 7794 true scaffold_5: 1742758-1750551 Capsella rubella
Carub.0005s0437 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1742758-1747757 Capsella rubella
Carub.0005s0437 5.0kb downstream 5.0kb downstream 7794 true scaffold_5: 1747758-1755551 Capsella rubella
Carub.0005s0437 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1750552-1755551 Capsella rubella
Carub.0005s0437 10.0kb upstream 10.0kb upstream 12794 true scaffold_5: 1737758-1750551 Capsella rubella
Carub.0005s0437 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1737758-1747757 Capsella rubella
Carub.0005s0437 10.0kb downstream 10.0kb downstream 12794 true scaffold_5: 1747758-1760551 Capsella rubella
Carub.0005s0437 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1750552-1760551 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380011 5261 Brassicaceae View MSA
123830199 5264 Brassicales-Malvales View MSA
124343286 5266 SBM View MSA
124252843 5268 Malvidae View MSA
124064009 5270 Rosid View MSA
123749335 5271 Pentapetalae View MSA
122788320 5272 Eudicot View MSA
122051385 5273 Angiosperm View MSA
121351135 5274 Embryophyte View MSA
123426003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain