Gene : Carub.0005s0458 C. rubella v1.1
Defline:  (1 of 3) PTHR11206//PTHR11206:SF79 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN Genomic Order:  458
Name:  ? Carub.0005s0458 Secondary Identifier:  ? PAC:39225902
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0458 0.5kb upstream 0.5kb upstream 3708 true scaffold_5: 1828110-1831817 Capsella rubella
Carub.0005s0458 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1831318-1831817 Capsella rubella
Carub.0005s0458 0.5kb downstream 0.5kb downstream 3708 true scaffold_5: 1827610-1831317 Capsella rubella
Carub.0005s0458 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1827610-1828109 Capsella rubella
Carub.0005s0458 1.0kb upstream 1.0kb upstream 4208 true scaffold_5: 1828110-1832317 Capsella rubella
Carub.0005s0458 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1831318-1832317 Capsella rubella
Carub.0005s0458 1.0kb downstream 1.0kb downstream 4208 true scaffold_5: 1827110-1831317 Capsella rubella
Carub.0005s0458 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1827110-1828109 Capsella rubella
Carub.0005s0458 2.0kb upstream 2.0kb upstream 5208 true scaffold_5: 1828110-1833317 Capsella rubella
Carub.0005s0458 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1831318-1833317 Capsella rubella
Carub.0005s0458 2.0kb downstream 2.0kb downstream 5208 true scaffold_5: 1826110-1831317 Capsella rubella
Carub.0005s0458 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1826110-1828109 Capsella rubella
Carub.0005s0458 5.0kb upstream 5.0kb upstream 8208 true scaffold_5: 1828110-1836317 Capsella rubella
Carub.0005s0458 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1831318-1836317 Capsella rubella
Carub.0005s0458 5.0kb downstream 5.0kb downstream 8208 true scaffold_5: 1823110-1831317 Capsella rubella
Carub.0005s0458 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1823110-1828109 Capsella rubella
Carub.0005s0458 10.0kb upstream 10.0kb upstream 13208 true scaffold_5: 1828110-1841317 Capsella rubella
Carub.0005s0458 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1831318-1841317 Capsella rubella
Carub.0005s0458 10.0kb downstream 10.0kb downstream 13208 true scaffold_5: 1818110-1831317 Capsella rubella
Carub.0005s0458 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1818110-1828109 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366585 5261 Brassicaceae View MSA
123836545 5264 Brassicales-Malvales View MSA
124345472 5266 SBM View MSA
124244328 5268 Malvidae View MSA
124068110 5270 Rosid View MSA
123753109 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain