Gene : Carub.0005s0473 C. rubella v1.1
Defline:  (1 of 1) KOG2164 - Predicted E3 ubiquitin ligase Genomic Order:  473
Name:  ? Carub.0005s0473 Secondary Identifier:  ? PAC:39226110
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0473 0.5kb upstream 0.5kb upstream 4330 true scaffold_5: 1884222-1888551 Capsella rubella
Carub.0005s0473 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1884222-1884721 Capsella rubella
Carub.0005s0473 0.5kb downstream 0.5kb downstream 4330 true scaffold_5: 1884722-1889051 Capsella rubella
Carub.0005s0473 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1888552-1889051 Capsella rubella
Carub.0005s0473 1.0kb upstream 1.0kb upstream 4830 true scaffold_5: 1883722-1888551 Capsella rubella
Carub.0005s0473 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1883722-1884721 Capsella rubella
Carub.0005s0473 1.0kb downstream 1.0kb downstream 4830 true scaffold_5: 1884722-1889551 Capsella rubella
Carub.0005s0473 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1888552-1889551 Capsella rubella
Carub.0005s0473 2.0kb upstream 2.0kb upstream 5830 true scaffold_5: 1882722-1888551 Capsella rubella
Carub.0005s0473 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1882722-1884721 Capsella rubella
Carub.0005s0473 2.0kb downstream 2.0kb downstream 5830 true scaffold_5: 1884722-1890551 Capsella rubella
Carub.0005s0473 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1888552-1890551 Capsella rubella
Carub.0005s0473 5.0kb upstream 5.0kb upstream 8830 true scaffold_5: 1879722-1888551 Capsella rubella
Carub.0005s0473 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1879722-1884721 Capsella rubella
Carub.0005s0473 5.0kb downstream 5.0kb downstream 8830 true scaffold_5: 1884722-1893551 Capsella rubella
Carub.0005s0473 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1888552-1893551 Capsella rubella
Carub.0005s0473 10.0kb upstream 10.0kb upstream 13830 true scaffold_5: 1874722-1888551 Capsella rubella
Carub.0005s0473 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1874722-1884721 Capsella rubella
Carub.0005s0473 10.0kb downstream 10.0kb downstream 13830 true scaffold_5: 1884722-1898551 Capsella rubella
Carub.0005s0473 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1888552-1898551 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370607 5261 Brassicaceae View MSA
123837809 5264 Brassicales-Malvales View MSA
124341668 5266 SBM View MSA
124243095 5268 Malvidae View MSA
124060786 5270 Rosid View MSA
123742061 5271 Pentapetalae View MSA
122793495 5272 Eudicot View MSA
122042542 5273 Angiosperm View MSA
121344560 5274 Embryophyte View MSA
123423758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain